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CMOS weak-inversion log-domain glycolytic oscillator: a cytomimetic circuit example

机译:CMOS弱反转对数域糖酵解振荡器:仿生电路示例

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This paper presents a 3 V, 1.21μW subthreshold log-domain circuit which mimics the oscillations observed during the biochemical process of glycolysis due to the phosphofructokinase enzyme. The proposed electronic circuit is able to simulate the dynamics of the glycolytic oscillator and represent the time-dependent concentration changes of the reactants and the products of the chemical process based on nonlinear differential equations which describe the biological system. By modifying specific circuit parameters, which correspond to certain chemical parameters, good agreement between the biochemical and electrical model results has been reached. The paper details the similarities between the equations that describe the biochemical process and the equations derived from the circuit analysis of a transistor and a source-connected linear capacitor, a topology also known as the Bernoulli Cell. With the use of the Bernoulli Cell formalism, the chemical equations which describe the biochemical system have been transformed into their electrical equivalents. The analog circuit, which implements the whole process, has been synthesised, and simulation results including Monte Carlo analysis are provided, in order to verify the robustness of the proposed circuit and to compare its dynamics with prototype biological behaviour.
机译:本文提出了一个3 V,1.21μW的亚阈值对数域电路,该电路模拟了由于磷酸果糖激酶而在糖酵解的生化过程中观察到的振荡。所提出的电子电路能够模拟糖酵解振荡器的动力学,并基于描述生物系统的非线性微分方程来表示反应物和化学过程产物随时间的浓度变化。通过修改与某些化学参数相对应的特定电路参数,已达到生化模型和电模型结果之间的良好一致性。本文详细描述了描述生化过程的方程与从晶体管和与源连接的线性电容器(也称为伯努利电池)的电路分析得出的方程之间的相似性。使用伯努利细胞形式论,描述生化系统的化学方程式已转换为它们的电当量。已对实现整个过程的模拟电路进行了综合,并提供了包括蒙特卡洛分析在内的仿真结果,以验证所提出电路的鲁棒性,并将其动力学与原型生物行为进行比较。

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