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Sparse Image Reconstruction for Molecular Imaging

机译:分子成像的稀疏图像重建

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The application that motivates this paper is molecular imaging at the atomic level. When discretized at subatomic distances, the volume is inherently sparse. Noiseless measurements from an imaging technology can be modeled by convolution of the image with the system point spread function (psf). Such is the case with magnetic resonance force microscopy (MRFM), an emerging technology where imaging of an individual tobacco mosaic virus was recently demonstrated with nanometer resolution. We also consider additive white Gaussian noise (AWGN) in the measurements. Many prior works of sparse estimators have focused on the case when ${bf H}$ has low coherence; however, the system matrix ${bf H}$ in our application is the convolution matrix for the system psf. A typical convolution matrix has high coherence. This paper, therefore, does not assume a low coherence ${bf H}$. A discrete-continuous form of the Laplacian and atom at zero (LAZE) p.d.f. used by Johnstone and Silverman is formulated, and two sparse estimators derived by maximizing the joint p.d.f. of the observation and image conditioned on the hyperparameters. A thresholding rule that generalizes the hard and soft thresholding rule appears in the course of the derivation. This so-called hybrid thresholding rule, when used in the iterative thresholding framework, gives rise to the hybrid estimator, a generalization of the lasso. Estimates of the hyperparameters for the lasso and hybrid estimator are obtained via Stein's unbiased risk estimate (SURE). A numerical study with a Gaussian psf and two sparse images shows that the hybrid estimator outperforms the lasso.
机译:激发本文工作的应用是原子级的分子成像。当在亚原子距离处离散时,体积固有地稀疏。成像技术的无噪声测量可以通过将图像与系统点扩展函数(psf)卷积来建模。磁共振力显微镜(MRFM)就是这种情况,这是一种新兴技术,最近以纳米分辨率显示了单个烟草花叶病毒的成像。在测量中,我们还会考虑加性高斯白噪声(AWGN)。稀疏估计器的许多先前工作都集中在$ {bf H} $具有低相干性的情况下;但是,在我们的应用程序中,系统矩阵$ {bf H} $是系统psf的卷积矩阵。典型的卷积矩阵具有较高的相干性。因此,本文不假定相干性较低{{bf H} $。拉普拉斯算子和原子为零(LAZE)p.d.f的离散连续形式。公式化了Johnstone和Silverman使用的公式,并通过最大化联合p.d.f得出两个稀疏估计量。以超参数为条件的观察结果和图像。在推导过程中出现了概括硬阈值和软阈值规则的阈值规则。当在迭代阈值框架中使用此所谓的混合阈值规则时,会产生混合估计量,即套索的概括。套索和混合估计器的超参数估计值是通过Stein的无偏风险估计值(SURE)获得的。用高斯psf和两个稀疏图像进行的数值研究表明,混合估计器优于套索。

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