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Building a patient-specific model using transfer learning for four-dimensional cone beam computed tomography augmentation

机译:使用转移学习为四维锥梁梁计算断层扫描增强构建特定于患者的模型

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Background: We previously developed a deep learning model to augment the quality of four-dimensional (4D) cone-beam computed tomography (CBCT). However, the model was trained using group data, and thus was not optimized for individual patients. Consequently, the augmented images could not depict small anatomical structures, such as lung vessels. Methods: In the present study, the transfer learning method was used to further improve the performance of the deep learning model for individual patients. Specifically, a U-Net-based model was first trained to augment 4D-CBCT using group data. Next, transfer learning was used to fine tune the model based on a specific patient’s available data to improve its performance for that individual patient. Two types of transfer learning were studied: layer-freezing and whole-network fine-tuning. The performance of the transfer learning model was evaluated by comparing the augmented CBCT images with the ground truth images both qualitatively and quantitatively using a structure similarity index matrix (SSIM) and peak signal-to-noise ratio (PSNR). The results were also compared to those obtained using only the U-Net method. Results: Qualitatively, the patient-specific model recovered more detailed information of the lung area than the group-based U-Net model. Quantitatively, the SSIM improved from 0.924 to 0.958, and the PSNR improved from 33.77 to 38.42 for the whole volumetric images for the group-based U-Net and patient-specific models, respectively. The layer-freezing method was found to be more efficient than the whole-network fine-tuning method, and had a training time as short as 10 minutes. The effect of augmentation by transfer learning increased as the number of projections used for CBCT reconstruction decreased. Conclusions: Overall, the patient-specific model optimized by transfer learning was efficient and effective at improving image qualities of augmented undersampled three-dimensional (3D)- and 4D-CBCT images, and could be extremely valuable for applications in image-guided radiation therapy.
机译:背景:我们以前开发了一个深入学习模型,增加了四维(4D)锥形梁计算断层扫描(CBCT)的质量。但是,使用组数据培训该模型,因此未针对个体患者进行优化。因此,增强图像不能描绘小的解剖结构,例如肺血管。方法:在本研究中,转移学习方法用于进一步提高个体患者的深层学习模型的性能。具体地,首先使用组数据训练基于U-Net的模型来增强4D-CBCT。接下来,转移学习用于根据特定患者的可用数据微调模型,以提高其对该个体患者的性能。研究了两种类型的转移学习:层冻结和全网络微调。通过使用结构相似性指数矩阵(SSIM)和峰值信噪比(PSNR)将增强的CBCT图像与地面真理图像与地面真理图像进行比较,通过将增强的CBCT图像与地面真理图像进行比较来评估转移学习模型的性能。还将结果与仅使用U-Net方法获得的结果进行了比较。结果:定性,患者特异性模型恢复了肺区的更详细信息而不是基于基于组的U-Net模型。定量地,SSIM从0.924增加到0.958,PSNR分别为基于组的U-Net和患者特定模型的整个体积图像改善了33.77至38.42。发现层冷冻方法比全网络微调方法更有效,并且培训时间短至10分钟。随着用于CBCT重建的投影数量下降的投影数量增加,增强的效果增加。结论:总体而言,通过转移学习优化的患者特异性模型在改善增强欠采样的三维(3D) - 和4D-CBCT图像的图像质量方面有效且有效,并且对于图像引导放射治疗中的应用可能是极为有价值的。

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