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Artificial intelligence for advance requesting of immunohistochemistry in diagnostically uncertain prostate biopsies

机译:诊断不确定前列腺活检的免疫组织化学提升人工智能

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The use of immunohistochemistry in the reporting of prostate biopsies is an important adjunct when the diagnosis is not definite on haematoxylin and eosin (H E) morphology alone. The process is however inherently inefficient with delays while waiting for pathologist review to make the request and duplicated effort reviewing a case more than once. In this study, we aimed to capture the workflow implications of immunohistochemistry requests and demonstrate a novel artificial intelligence tool to identify cases in which immunohistochemistry (IHC) is required and generate an automated request. We conducted audits of the workflow for prostate biopsies in order to understand the potential implications of automated immunohistochemistry requesting and collected prospective cases to train a deep neural network algorithm to detect tissue regions that presented ambiguous morphology on whole slide images. These ambiguous foci were selected on the basis of the pathologist requesting immunohistochemistry to aid diagnosis. A gradient boosted trees classifier was then used to make a slide-level prediction based on the outputs of the neural network prediction. The algorithm was trained on annotations of 219 immunohistochemistry-requested and 80 control images, and tested by threefold cross-validation. Validation was conducted on a separate validation dataset of 222 images. Non IHC-requested cases were diagnosed in 17.9 min on average, while IHC-requested cases took 33.4 min over multiple reporting sessions. We estimated 11 min could be saved on average per case by automated IHC requesting, by removing duplication of effort. The tool attained 99% accuracy and 0.99 Area Under the Curve (AUC) on the test data. In the validation, the average agreement with pathologists was 0.81, with a mean AUC of 0.80. We demonstrate the proof-of-principle that an AI tool making automated immunohistochemistry requests could create a significantly leaner workflow and result in pathologist time savings.
机译:在报告前列腺活检的报告中使用免疫组织化学是一种重要的辅助,当诊断并不明确在血清毒素和单独的嗜素(H e)形态上。然而,在等待病理学家审查时,该过程具有延迟的效率效率效率低下,以使请求和重复的努力审查多次案例。在这项研究中,我们旨在捕获免疫组化请求的工作流程影响,并展示一种新颖的人工智能工具,以确定需要免疫组织化学(IHC)并生成自动请求的情况。我们对前列腺活组织检查的工作流程进行了审核,以了解自动免疫组化的潜在影响要求和收集预期案件培训深度神经网络算法,以检测整个幻灯片图像上呈现暧昧形态的组织区域。根据要求免疫组织化学辅助诊断的病理学家选择这些模糊的病灶。然后使用梯度提升树分类器基于神经网络预测的输出来制造载玻片级预测。该算法培训了219个免疫组化请求和80个控制图像的注释,并通过三倍交叉验证测试。在222个图像的单独验证数据集上进行验证。非IHC被要求的病例平均诊断为17.9分钟,而IHC要求的案件在多个报告会议上花了33.4分钟。通过删除重复努力,我们估计11分钟平均每种情况下保存平均每种情况。该工具在测试数据上达到了99%的精度和0.99面积。在验证中,与病理学家的平均协议为0.81,平均AUC为0.80。我们展示了原则上,使自动化免疫组化请求的AI工具可以创建一个明显的工作流程并导致病理学家节省时间。

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