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首页> 外文期刊>mSystems >Genome-Wide Identification of Essential and Auxiliary Gene Sets for Magnetosome Biosynthesis in Magnetospirillum gryphiswaldense
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Genome-Wide Identification of Essential and Auxiliary Gene Sets for Magnetosome Biosynthesis in Magnetospirillum gryphiswaldense

机译:磁截式Gryphiswaldense中磁体生物合成基本和辅助基因集的基因组鉴定

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Magnetotactic bacteria (MTB) stand out by their ability to manufacture membrane-enclosed magnetic organelles, so-called magnetosomes. Previously, it has been assumed that a genomic region of approximately 100 kbp, the magnetosome island (MAI), harbors all genetic determinants required for this intricate biosynthesis process. Recent evidence, however, argues for the involvement of additional auxiliary genes that have not been identified yet. In the present study, we set out to delineate the full gene complement required for magnetosome production in the alphaproteobacterium Magnetospirillum gryphiswaldense using a systematic genome-wide transposon mutagenesis approach. By an optimized procedure, a Tn 5 insertion library of 80,000 clones was generated and screened, yielding close to 200 insertants with mild to severe impairment of magnetosome biosynthesis. Approximately 50% of all Tn 5 insertion sites mapped within the MAI, mostly leading to a nonmagnetic phenotype. In contrast, in the majority of weakly magnetic Tn 5 insertion mutants, genes outside the MAI were affected, which typically caused lower numbers of magnetite crystals with partly aberrant morphology, occasionally combined with deviant intracellular localization. While some of the Tn 5 -struck genes outside the MAI belong to pathways that have been linked to magnetosome formation before (e.g., aerobic and anaerobic respiration), the majority of affected genes are involved in so far unsuspected cellular processes, such as sulfate assimilation, oxidative protein folding, and cytochrome c maturation, or are altogether of unknown function. We also found that signal transduction and redox functions are enriched in the set of Tn 5 hits outside the MAI, suggesting that such processes are particularly important in support of magnetosome biosynthesis. IMPORTANCE Magnetospirillum gryphiswaldense is one of the few tractable model magnetotactic bacteria (MTB) for studying magnetosome biomineralization. So far, knowledge on the genetic determinants of this complex process has been mainly gathered using reverse genetics and candidate approaches. In contrast, nontargeted forward genetics studies are lacking, since application of such techniques in MTB has been complicated for a number of technical reasons. Here, we report on the first comprehensive transposon mutagenesis study in MTB, aiming at systematic identification of auxiliary genes necessary to support magnetosome formation in addition to key genes harbored in the magnetosome island (MAI). Our work considerably extends the candidate set of novel subsidiary determinants and shows that the full gene complement underlying magnetosome biosynthesis is larger than assumed. In particular, we were able to define certain cellular pathways as specifically important for magnetosome formation that have not been implicated in this process so far.
机译:磁通细菌(MTB)通过它们制造膜封闭的磁通细胞器,所谓的磁性体脱颖而出。以前,已经假设了约100kbp,磁性体岛(mai)的基因组区域,Harbors Harbors这是该复杂的生物合成过程所需的所有遗传决定因素。然而,最近的证据旨在参与尚未识别的额外辅助基因。在本研究中,我们首先使用系统基因组宽的转座子诱变方法描绘磁体生产中磁体产生所需的全基因补充剂。通过优化的方法,产生和筛选80,000个克隆的TN5插入文库,屈服于近200个插入剂,以严重损伤磁体生物合成。大约50%的所有TN 5插入位点映射在MAI内,主要导致非磁性表型。相反,在大多数弱磁TN5插入突变体中,麦白外的基因受到影响,这通常导致较少数量的磁铁矿晶体,部分异常的形态,偶尔将与偏差细胞内定位结合。虽然MAI之外的一些TN 5 -Struck基因属于(例如,有氧和厌氧呼吸)之前与磁体形成相关的途径,但大多数受影响的基因都参与到目前为止未经缺乏的细胞过程,例如硫酸盐同化,氧化蛋白折叠和细胞色素C成熟,或者是未知功能的完全。我们还发现,信号转导和氧化还原功能在MAI外的TN 5次数中富集,表明这些过程对于支持磁体生物合成尤其重要。重要的Masterspirillum GryphiswalDense是用于研究磁体生物矿化的少数易搬运模型磁通细菌(MTB)之一。到目前为止,关于这种复杂过程的遗传决定因素的知识主要是使用逆向遗传和候选方法来聚集的。相比之下,由于许多技术原因,因此缺乏非目标前进的遗传学研究,因为在MTB中的应用已经复杂化了。在这里,我们报告了MTB中的第一个全面的转座子诱变研究,旨在减缓支持磁体形成所必需的辅助基因的鉴定,除了磁性体岛(MAI)中覆盖的关键基因。我们的工作大大扩展了候选新型子公司决定因素,并表明磁体生物合成的潜在基因补充剂较大。特别是,我们能够定义某些细胞途径,对于迄今为止,在该过程中没有牵连的磁体形成特别重要。

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