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首页> 外文期刊>MycoKeys >DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including?five?new species
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DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including?five?new species

机译:DNA条形码识别黑皮毛霉眼科物种复合体(Lecanorales,Lecanoraceae)中形成地衣真菌的物种,包括五个新物种

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Recent studies using sequence data from multiple loci and coalescent-based species delimitation have revealed several species-level lineages within the phenotypically circumscribed taxon Rhizoplaca melanophthalma sensu lato. Here, we formally describe five new species within this group, Rhizoplaca occulta, Rhizoplaca parilis, Rhizoplaca polymorpha, Rhizoplaca porterii, and Rhizoplaca shushanii, using support from the coalescent-based species delimitation method implemented in the program Bayesian Phylogenetics and Phylogeography (BPP) as the diagnostic feature distinguishing new species. We provide a reference DNA sequence database using the ITS marker as a DNA barcode for identifying species within this complex. We also assessed intraspecific genetic distances within the six Rhizoplaca melanophthalma sensu lato species. While intraspecific genetic distances within the five new species were less than or equal to the lowest interspecific pairwise comparison values, an overlap in genetic distances within the Rhizoplaca melanophthalma sensu stricto clade suggests the potential for additional phenotypically cryptic lineages within this broadly distributed lineage. Overall, our results demonstrate the potential for accurately identifying species within the Rhizoplaca melanophthalma group by using molecular-based identification methods.
机译:最近使用来自多个基因座和基于聚结的物种划界的序列数据进行的研究表明,在表型限制的分类单元中,黑斑病根瘤菌中存在几种物种水平的谱系。在这里,我们利用贝叶斯系统发生学和系统发育学(BPP)程序中实现的基于聚结的物种定界方法的支持,正式描述了该组中的五个新物种,即隐匿根瘤菌,parhis,多形根瘤菌,porterii根瘤菌和shushanii根瘤菌。区分新物种的诊断功能。我们提供使用ITS标记物作为DNA条码的参考DNA序列数据库,用于识别该复合物中的物种。我们还评估了六个黑变种Rhizoplaca melanophthalma sensu lato物种内的种内遗传距离。虽然五个新物种内的种内遗传距离小于或等于最低的种间成对比较值,但黑穗菌根部进化枝内的遗传距离重叠表明,在这一广泛分布的谱系中可能存在其他表型隐性谱系。总体而言,我们的研究结果表明,通过使用基于分子的识别方法,可以准确地识别黑眼根瘤菌组内的物种。

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