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首页> 外文期刊>Frontiers in Plant Science >Editorial: Virtual Plants: Modeling Plant Architecture in Changing Environments
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Editorial: Virtual Plants: Modeling Plant Architecture in Changing Environments

机译:社论:虚拟植物:在不断变化的环境中建模植物架构

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There is increasing awareness that crop productivity is not only a function of the interaction between plants and their environment, but is also determined by the interplay between form and function. The need to better understand and even quantify this complex interaction has led to a new category of models of plant growth and development, often named virtual plants or functional-structural plant models (FSPM, Room et al., 1996 ; Prusinkiewicz, 2004 ; DeJong et al., 2011 ). In contrast to most traditional plant growth models, virtual plants explicitly describe the three-dimensional structure of plants.This issue is essentially about new approaches to quantify, explain, predict and eventually manipulate the trilateral interaction between plant function, structure and environment. Renton in his opinion paper relates these factors to the first three of the Aristotelian “causes,” his framework for explaining why things are as they are: function, Aristotle's “causa materialis,” describes the change of matter through transport and transformation, structure, Aristotle's “causa formalis” the change in form, and the effects of the environment, his “causa efficientis.” Renton adds Aristotle's fourth cause, the “causa finalis,” asking the “why” question, fundamental in science, and sees FSPMs as heuristic tools in an evolutionary sense.Central in this respect are morphogenetic processes on the organ level, like leaf expansion or internode elongation as presented in the paper of Demotes-Mainard et al. who analyze the inter-plant variation of a rose variety with respect to these processes. In cereals, the formation of side shoots, i.e., tillers, is an important mechanism to regulate stem and ear density, and senescence of individual tillers determines their productive phase. Evers and Vos review approaches to model tillering based on environmental cues or physiological conditions and show how architectural models can also serve to test hypotheses about the effects of signaling chemicals and substrate transport. The architecture of the vascular system of the vascular system determines water and solute transport. H?ltt? et al. show in their model analysis that the Münch hypothesis explains phloem transport across organs and even over long distances in tall trees. Beyer et al. also leave the level of the individual organ and model canopy development based on local leaf density. Their simulations of crown growth dynamics demonstrate the inherent dynamic properties of self-organization and adaptation of the proposed framework of partial differential equations. In addition, Shapiro et al. provided insight on plant morphodynamics at the cellular level. Their computational framework can be used for simulations of plant tissue including cell growth and cell division.Morphogenetic processes directly affect light interception at the organ and canopy level. Hofmann et al. show how a simple Monte Carlos-based model of radiation partitioning in vineyards can be used together with a water balance as a component of a growth model to evaluate the risks of climate change to grape production. Light is also the driving force in interplant competition reviewed in the article of Ford . His review assesses the role of plant architecture in interplant competition for light by focusing on both, the dynamics of stands undergoing competitions and the single plant as competitor. He develops a theory for the effects of plant architecture on competition and highlights the role of functional-structural plant models for simulating interplant competition. De Visser et al. analyze the effects of different plant morphologies and light regimes on light interception and light use efficiency, giving an example of the application of an FSPM approach not only for systems understanding, but also for systems control. Buck-Sorlin and Delaire widen the picture and analyze the prospects of FSPM in horticulture, a section of agriculture with a wide spectrum of crops and production systems where manipulation of growth through changing plant morphology by training and pruning is common practice.Models are by definition simplified representations of reality with simplicity and parsimony being guiding principles in modeling. Models of plant structure and functions are usually detailed and complex. As Renton puts it: “…the strength of FSPMs, their dynamic realism, is also their weakness, because it makes them relatively complex…”. Indeed, a more systematic understanding of the relationships between increasing model complexity and scientific gain would be desirable. Author contributions The editorial for the topic “Virtual plants: Modeling plant architecture in changing environments” was jointly written by KK and HS. Conflict of interest statement The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
机译:人们日益认识到,作物生产力不仅是植物与其环境之间相互作用的函数,而且还取决于形式与功能之间的相互作用。需要更好地理解甚至量化这种复杂的相互作用导致了植物生长和发展的新类型模型,通常被称为虚拟植物或功能结构植物模型(FSPM,Room等人,1996; Prusinkiewicz,2004; DeJong等人,2011)。与大多数传统植物生长模型相反,虚拟植物明确地描述了植物的三维结构,此问题本质上是关于量化,解释,预测并最终操纵植物功能,结构与环境之间的三方相互作用的新方法。伦顿(Renton)在其意见书中将这些因素与亚里士多德的“前因”联系起来,前三个原因是他解释事物之所以如此的框架:功能,亚里士多德的“因果关系”,描述了物质通过运输和转化,结构,亚里斯多德(Aristotle)的“考萨形式”(causaformalis)形式的变化以及环境的影响,他的“考萨效率”(causa efficiencyis)。伦顿增加了亚里斯多德的第四个原因,即“终末草”,提出了“为什么”的问题,这是科学的根本,并且将FSPM视为进化意义上的启发式工具。如Demotes-Mainard等人的论文中所述。他们针对这些过程分析了玫瑰品种的植物间变异。在谷物中,侧枝的形成即分till是调节茎和穗密度的重要机制,各个分individual的衰老决定了它们的生长期。 Evers和Vos回顾了基于环境提示或生理条件对分till进行建模的方法,并展示了建筑模型还可以如何用于检验有关信号化学物质和底物运输的假设。血管系统的血管系统结构决定了水和溶质的运输。嗯?等。在他们的模型分析中表明,Münch假设解释了韧皮部跨器官甚至在高大树木中的远距离迁移。 Beyer等。还会根据局部叶片密度离开各个器官的水平和模型冠层的发育。他们对冠生长动力学的仿真证明了自组织的固有动力学特性以及拟议的偏微分方程框架的适应性。此外,Shapiro等。提供了细胞水平上植物形态动力学的见解。它们的计算框架可用于模拟植物组织,包括细胞生长和细胞分裂。成色过程直接影响器官和冠层水平的光拦截。 Hofmann等。展示了如何将基于蒙特卡洛斯的简单的葡萄园辐射分配模型与水分平衡作为生长模型的一部分一起使用,以评估气候变化对葡萄生产的风险。福特在文章中回顾了光也是植物间竞争的驱动力。他的评论通过侧重于进行比赛的看台的动态以及作为竞争者的单个植物来评估植物架构在植物间竞争中的作用。他开发了一种植物构造对竞争影响的理论,并强调了功能结构植物模型在模拟植物间竞争中的作用。 De Visser等。分析了不同植物形态和光照方式对光的拦截和光的利用效率的影响,给出了一个FSPM方法的应用实例,不仅可以用于系统理解,还可以用于系统控制。 Buck-Sorlin和Delaire拓宽了图景并分析了园艺中FSPM的前景,这是一种农业领域,具有广泛的农作物和生产系统,通常通过训练和修剪来改变植物形态来控制生长。简单性和简约性是建模的指导原则,简化了对现实的表示。工厂结构和功能的模型通常是详细而复杂的。正如伦顿指出的那样:“…FSPM的优势,动态的现实性也是它们的劣势,因为它使它们相对复杂……”。确实,需要对增加的模型复杂性和科学成果之间的关系有更系统的理解。作者贡献KK和HS共同撰写了主题为“虚拟植物:在不断变化的环境中模拟植物体系结构”的社论。利益冲突声明作者声明,这项研究是在没有任何商业或金融关系的情况下进行的,可以将其解释为潜在的利益冲突。

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