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A Uniform Multiscale Meta-model of BioShape

机译: BioShape 的统一多尺度元模型

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Existing approaches in multiscale (MS) science and engineering have evolved from a range of ideas and solutions that are reflective of their original problem domains. As a result, research in MS science has followed widely diverse and disjoint paths, which present a barrier to cross pollination of ideas and application of methods outside their application domains.The status of the research environment calls for a methodological framework able to (i) provide acommonlanguage to modelling and simulating MS problems across a range of scientific and engineering disciplines and, consequently, (ii) characterize critical common issues arising in MS problems in anuniformsetting.In this paper, we contribute in this sense. Taking inspiration from the Complex Automata (CxA) MS approach, we formally define and enrich the meta-model of BioShape – put forward as a scale-independent MS simulation environment – and we exploit it to give a uniform treatment of generally defined coupling schemes, in particular the micro-macro one applied to the bone remodelling process. Similarly to CxA, also the BioShape meta-model enjoys two important features: namely, (i) a MS system can be decomposed in uniform single-scale models, each one described by a generic sequence of calls to well-defined operators, and (ii) the link between any two single-scale models can be expressed as a flow of data between a pair of these operators by well-defined coupling schemes. As a consequence, such features not only enforce and formally prove the scale-independence property of the BioShape simulator, but also makes the BioShape meta-model a common and uniform MS modelling paradigm across a range of heterogeneous application domains.
机译:多尺度(MS)科学和工程学中的现有方法已经从一系列反映其原始问题域的想法和解决方案中演变而来。结果,MS科学的研究遵循了多种多样且不相交的路径,这为跨学科授粉的思想和方法在其应用领域之外的应用提供了障碍。研究环境的现状要求能够(i)为跨科学和工程学科的MS问题建模和仿真提供了一种通用语言,因此(ii)在均匀设置中表征MS问题中出现的关键性常见问题。在本文中,我们在这个意义上做出了贡献。借鉴复杂自动机(CxA)质谱方法的启发,我们正式定义和丰富了BioShape的元模型(作为与规模无关的质谱模拟环境提出),并利用它对一般定义的耦合方案进行统一处理,特别是应用于骨骼重塑过程的微宏。与CxA相似,BioShape元模型也具有两个重要特征:(i)可以将MS系统分解为统一的单尺度模型,每个模型都由对定义明确的运算符的通用调用序列来描述,并且( ii)任何两个单尺度模型之间的链接都可以通过定义明确的耦合方案表示为一对运算符之间的数据流。结果,这些功能不仅强制并正式证明了BioShape模拟器的尺度独立性,而且使BioShape元模型成为跨各种异构应用领域的通用且统一的MS建模范例。

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