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首页> 外文期刊>Electronic Journal of Applied Statistical Analysis >An efficient gene selection method for high-dimensional microarray data based on sparse logistic regression
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An efficient gene selection method for high-dimensional microarray data based on sparse logistic regression

机译:基于稀疏逻辑回归的高维微阵列数据有效基因选择方法

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Gene selection in high-dimensional microarray data has become increasingly important in cancer classification. The high dimensionality of microarray data makes the application of many expert classifier systems difficult.To simultaneously perform gene selection and estimate the gene coefficientsin the model, sparse logistic regression using L1-norm was successfully applied in high-dimensional microarray data. However, when there are highcorrelation among genes, L1-norm cannot perform effectively. To addressthis issue, an efficient sparse logistic regression (ESLR) is proposed. Extensive applications using high-dimensional gene expression data show that ourproposed method can successfully select the highly correlated genes. Furthermore, ESLR is compared with other three methods and exhibits competitiveperformance in both classification accuracy and Youdens index. Thus, wecan conclude that ESLR has significant impact in sparse logistic regressionmethod and could be used in the field of high-dimensional microarray datacancer classification.
机译:高维微阵列数据中的基因选择在癌症分类中变得越来越重要。微阵列数据的高维性使得许多专家分类系统难以应用。为了同时进行基因选择和估计模型中的基因系数,使用L1-范数的稀疏逻辑回归已成功应用于高维微阵列数据中。但是,当基因之间具有高度相关性时,L1-范数不能有效执行。为了解决这个问题,提出了一种有效的稀疏逻辑回归(ESLR)。利用高维基因表达数据的广泛应用表明,我们提出的方法可以成功地选择高度相关的基因。此外,将ESLR与其他三种方法进行比较,并且在分类准确度和Youdens指数方面均表现出竞争优势。因此,我们可以得出结论,ESLR在稀疏逻辑回归方法中具有重大影响,可用于高维微阵列数据癌症分类领域。

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