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首页> 外文期刊>Acta amazonica >Molecular characterization of progenies of bacurizeiro ( Platonia insignis ) from Maraj???3 Island, northeastern Amazon
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Molecular characterization of progenies of bacurizeiro ( Platonia insignis ) from Maraj???3 Island, northeastern Amazon

机译:亚马逊东北部Maraj ??? 3岛的杆状杆菌(Platonia insignis)的子代的分子特征

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ABSTRACT The bacurizeiro ( Platonia insignis Mart.) is a tree native to the Amazon whose fruit is much used in the gastronomy in the North and Northeast regions of Brazil. Due to its great economic potential for these regions, the species is being conserved in germplasm banks to support genetic breeding programs. The aim of this work was the molecular characterization of P. insignis accessions belonging to the germplasm bank of the Embrapa Eastern Amazon research unit using ISSR (Inter Simple Sequence Repeat) markers. Seventy-eight accessions of P. insignis belonging to 16 progenies were sampled in two different localities on Maraj???3 Island, state of Par????, Brazil. Among the 16 progenies, seven were collected in Soure and nine in Salvaterra. The 78 accessions were genotyped with 23 pre-selected primers. We obtained 121 amplified products, of which 54 were polymorphic. The most polymorphic primers were UBC 834, UBC 899 and UBC 900. Primers UBC810 and UBC884 did not amplify polymorphic bands. Forty-nine markers out of 54 were selected for genetic analyses. AMOVA within and among progenies showed low genetic differentiation (???| PT = 0.064, P<0.001) with higher diversity within progenies (96%), low genetic differentiation among sampling localities (???| PT = 0.025, P<0.013), and higher diversity within (98%) than among localities. Clustering by UPGMA based on Jaccard similarities among pairs of accessions did not separate genotypes according to progeny or sampling localitiy. We recommend that new germplasm surveys consider a greater sampling effort within sampling localitites.
机译:摘要bacurizeiro(Platonia insignis Mart。)是一棵产自亚马逊河的树,其果实在巴西北部和东北部地区的美食中被大量使用。由于其在这些地区的巨大经济潜力,该物种被保存在种质库中以支持遗传育种计划。这项工作的目的是使用ISSR(内部简单序列重复)标记对属于Embrapa Eastern Amazon研究单位的种质库的印度小P(P。insignis)种质进行分子表征。在巴西帕拉奇州的Maraj ??? 3 Island的两个不同地区对属于16个后代的68个In.signis昆虫进行了采样。在16个子代中,有7个在Soure收集,9个在Salvaterra收集。用23种预选引物对78个种进行基因分型。我们获得了121个扩增产物,其中54个是多态的。最多态的引物是UBC 834,UBC 899和UBC900。引物UBC810和UBC884不会扩增多态条带。从54个标记中选择了49个标记进行遗传分析。子代内和子代之间的AMOVA表现出较低的遗传分化(??? | PT = 0.064,P <0.001),子代内具有更高的多样性(96%),采样地点之间的遗传分化低(??? | PT = 0.025,P <0.013 ),而且(98%)内部的多样性要高于地区。 UPGMA基于成对种质之间的Jaccard相似性进行聚类,并未根据子代或采样地点将基因型分开。我们建议新的种质调查在取样本地样品时考虑更多的取样工作。

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    《Acta amazonica》 |2017年第4期|共页
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