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首页> 外文期刊>Cellular Physiology and Biochemistry >Prognostic Significance of LncRNA PVT1 and Its Potential Target Gene Network in Human Cancers: a Comprehensive Inquiry Based Upon 21 Cancer Types and 9972 Cases
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Prognostic Significance of LncRNA PVT1 and Its Potential Target Gene Network in Human Cancers: a Comprehensive Inquiry Based Upon 21 Cancer Types and 9972 Cases

机译:LncRNA PVT1及其潜在靶基因网络在人类癌症中的预后意义:基于21种癌症类型和9972例病例的综合研究

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Background/Aims Whether the level of long noncoding RNA plasmacytoma variant translocation 1 gene (lncRNA PVT1) expression influences the clinical development and outcome of human cancers has not been thoroughly elucidated to date. Inconsistencies still exist regarding the associations between PVT1 and the clinicopathological features, including patient survival data. Additionally, the regulatory mechanism of PVT1 among human cancers remains unclear. Methods we conducted a comprehensive inquiry to verify the implication of PVT1 expression in cancer patients by conducting a meta-analysis of 19 selected studies and The Cancer Genome Atlas (TCGA) database to examine the relationship between PVT1 expression and both the prognosis and clinicopathological features of cancer patients using STATA 12.0. In addition, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses of the potential mRNA target genes of PVT1 gathered from TANRIC and Multi Experiment Matrix (MEM) were performed. Results The level of PVT1 expression in tumor tissues was higher than in paired non-cancer tissues and was significantly associated with a poorer prognosis in cancer patients. Additionally, overexpression of PVT1 was significantly correlated with histological differentiation, tumor (T) classification, lymph node (N) classification and TNM stages. Furthermore, a total of 462 validated target genes were identified, and the GO and KEGG analyses demonstrated that the validated targets of PVT1 were significantly enriched in several pathways, including the GnRH signaling pathway, the Cytokine-cytokine receptor interaction pathway, the Inflammatory mediator regulation of TRP channels pathway, and the Neuroactive ligand-receptor interaction pathway. Conclusion PVT1 may serve as a potential biomarker associated with the progression and prognosis of human cancers.
机译:背景/目的迄今为止,尚未彻底阐明长期非编码RNA浆细胞瘤变位1基因(lncRNA PVT1)的表达水平是否会影响人类癌症的临床发展和结果。关于PVT1与临床病理特征(包括患者生存数据)之间的关联仍然存在不一致之处。此外,PVT1在人类癌症中的调控机制仍不清楚。方法我们通过对19项选择的研究和The Cancer Genome Atlas(TCGA)数据库进行荟萃分析,对PVT1表达与癌症患者的预后和临床病理特征之间的关系进行了荟萃分析,以验证PVT1表达在癌症患者中的意义。癌症患者使用STATA 12.0。此外,对从TANRIC和多实验矩阵(MEM)收集的PVT1的潜在mRNA靶基因进行了基因本体论(GO)和《京都议定书》,对基因和基因组百科全书(KEGG)进行了途径富集分析。结果肿瘤组织中PVT1表达水平高于配对的非癌组织,并且与癌症患者的不良预后显着相关。此外,PVT1的过表达与组织学分化,肿瘤(T)分类,淋巴结(N)分类和TNM分期显着相关。此外,总共鉴定了462个经过验证的靶基因,GO和KEGG分析表明,PVT1的经过验证的靶标显着富集了多个途径,包括GnRH信号传导途径,细胞因子-细胞因子受体相互作用途径,炎症介质调节TRP通道途径,以及神经活性配体-受体相互作用途径。结论PVT1可能是与人类癌症进展和预后相关的潜在生物标志物。

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