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Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome

机译:谷氨酸棒杆菌染色体中由Mu驱动的重组mini-Mu单元DNA的转座

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摘要

A dual-component Mu-transposition system was modified for the integration/amplification of genes in Corynebacterium. The system consists of two types of plasmids: (i) a non-replicative integrative plasmid that contains the transposing mini-Mu(>LR) unit bracketed by the >L/>R Mu ends or the mini-Mu(>LER) unit, which additionally contains the enhancer element, >E, and (ii) an integration helper plasmid that expresses the transposition factor genes for MuA and MuB. Efficient transposition in the C. glutamicum chromosome (≈ 2 × 10−4 per cell) occurred mainly through the replicative pathway via cointegrate formation followed by possible resolution. Optimizing the >E location in the mini-Mu unit significantly increased the efficiency of Mu-driven intramolecular transposition–amplification in C. glutamicum as well as in gram-negative bacteria. The new C. glutamicum genome modification strategy that was developed allows the consequent independent integration/amplification/fixation of target genes at high copy numbers. After integration/amplification of the first mini-Mu(>LER) unit in the C. glutamicum chromosome, the >E-element, which is bracketed by lox-like sites, is excised by Cre-mediated fashion, thereby fixing the truncated mini-Mu(>LR) unit in its position for the subsequent integration/amplification of new mini-Mu(>LER) units. This strategy was demonstrated using the genes for the citrine and green fluorescent proteins, yECitrine and yEGFP, respectively.Electronic supplementary materialThe online version of this article (10.1007/s00253-018-8767-1) contains supplementary material, which is available to authorized users.
机译:修改了双组分Mu转座系统,用于整合/扩增棒状杆菌中的基因。该系统由两种类型的质粒组成:(i)一种非复制性整合质粒,其包含由> L / 括起来的转置mini-Mu(> LR )单元> R Mu末端或mini-Mu(> LER )单元,其中还包含增强子元件> E 和(ii)整合辅助质粒,表达MuA和MuB的转座因子基因。谷氨酸棒杆菌染色体的高效转座(每个细胞≈2×10 −4 )主要通过共整合形成的复制途径发生,随后可能的分离。优化mini-Mu单元中的> E 位置可以显着提高Mu驱动的谷氨酸棒杆菌和革兰氏阴性细菌中分子内转座扩增的效率。所开发的新的谷氨酸棒杆菌基因组修饰策略允许随后以高拷贝数独立整合/扩增/固定靶基因。整合/扩增谷氨酸棒杆菌染色体中的第一个mini-Mu(> LER )单元后,被Lox样位包围的> E 元素是通过Cre介导的方式切除,从而将截短的mini-Mu(> LR )单元固定在其位置,以便随后对新的mini-Mu(> LER )单元进行集成/放大。电子补充材料本文的在线版本(10.1007 / s00253-018-8767-1)包含补充材料,授权用户可以使用此方法,分别使用柠檬酸和绿色荧光蛋白的基因yECitrine和yEGFP进行了证明。 。

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