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Microbial enrichment and gene functional categories revealed on the walls of a spent fuel pool of a nuclear power plant

机译:核电厂乏燃料池壁上发现的微生物富集和基因功能类别

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摘要

Microorganisms developing in the liner of the spent fuel pool (SFP) and the fuel transfer channel (FTC) of a Nuclear Power Plant (NPP) can form high radiation resistant biofilms and cause corrosion. Due to difficulties and limitations to obtain large samples from SFP and FTC, cotton swabs were used to collect the biofilm from the wall of these installations. Molecular characterization was performed using massively parallel sequencing to obtain a taxonomic and functional gene classification. Also, samples from the drainage system were evaluated because microorganisms may travel over the 12-meter column of the pool water of the Brazilian Nuclear Power Plant (Angra1), which has been functioning since 1985. Regardless of the treatment of the pool water, our data reveal the unexpected presence of Fungi (Basidiomycota and Ascomycota) as the main contaminators of the SFP and FTC. Ustilaginomycetes (Basidiomycota) was the major class contributor (70%) in the SFP and FTC reflecting the little diversity in these sites; nevertheless, Proteobacteria, Actinobacteria, Firmicutes (Bacilli) were present in small proportions. Mapping total reads against six fungal reference genomes indicate that there is, in fact, a high abundance of fungal sequences in samples collected from SFP and FTC. Analysis of the ribosomal internal transcribed spacer (ITS) 1 and 2 regions and the protein found in the mitochondria of eukaryotic cells, cytochrome b (cytb) grouped our sample fungi in the clade 7 as Ustilago and Pseudozyma. In contrast, in the drainage system, Alphaproteobacteria were present in high abundances (55%). The presence of Sphingopyxis, Mesorhizobium, Erythrobacter, Sphingomonas, Novosphingobium, Sphingobium, Chelativorans, Oceanicaulis, Acidovorax, and Cyanobacteria was observed. Based on genomic annotation data, the assessment of the biological function found a higher proportion of protein-coding sequences related to respiration and protein metabolism in SFP and FTC samples. The knowledge of this biological inventory present in the system may contribute to further studies of potential microorganisms that might be useful for bioremediation of nuclear waste.
机译:在乏燃料池(SFP)和核电站(NPP)的燃料传输通道(FTC)的内壁中生长的微生物会形成高抗辐射生物膜并引起腐蚀。由于从SFP和FTC获得大量样品的困难和局限性,棉签被用来从这些设施的墙壁收集生物膜。使用大规模平行测序进行分子表征以获得分类学和功能基因分类。此外,还对排水系统的样本进行了评估,因为微生物可能会从1985年开始运行的巴西核电厂(Angra1)的池水的12米高柱上传播。无论池水如何处理,我们的数据揭示了真菌(Basidiomycota和Ascomycota)出乎意料的存在,它们是SFP和FTC的主要污染物。在SFP和FTC中,Ustilaginomycetes(Basidiomycota)是主要的分类贡献者(占70%),反映出这些地点的多样性很少。但是,变形杆菌,放线菌,硬毛菌(芽孢杆菌)的比例很小。对六个真菌参考基因组的总读数作图表明,事实上,从SFP和FTC收集的样品中真菌序列非常丰富。分析核糖体内部转录间隔区(ITS)1和2区域以及真核细胞线粒体中发现的蛋白质,细胞色素b(cytb)将我们在第7进化枝中的样本真菌归类为Ustilago和Pseudozyma。相比之下,在排水系统中,高变形杆菌(55%)的存在是变形杆菌。观察到了鞘氨醇单胞菌,中生根瘤菌,红细菌,鞘氨醇单胞菌,新孢子虫,鞘氨醇,螯合蛇菌,大洋藻科,嗜酸菌属和蓝细菌的存在。根据基因组注释数据,对生物学功能的评估发现SFP和FTC样品中与呼吸作用和蛋白质代谢有关的蛋白质编码序列比例更高。系统中存在的这种生物清单的知识可能有助于进一步研究可能对核废料进行生物修复的潜在微生物。

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