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Cell classification by moments and continuous wavelet transform methods

机译:通过矩和连续小波变换方法进行细胞分类

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摘要

Image processing techniques are bringing new insights to biomedical research. The automatic recognition and classification of biomedical objects can enhance work efficiency while identifying new inter-relationships among biological features. In this work, a simple rule-based decision tree classifier is developed to classify typical features of mixed cell types investigated by atomic force microscopy (AFM). A combination of continuous wavelet transform (CWT) and moment-based features are extracted from the AFM data to represent that shape information of different cellular objects at multiple resolution levels. The features are shown to be invariant under operations of translation, rotation, and scaling. The features are then used in a simple rule-based classifier to discriminate between anucleate versus nucleate cell types or to distinguish cells from a fibrous environment such as a tissue scaffold or stint. Since each feature has clear physical meaning, the decision rule of this tree classifier is simple, which makes it very suitable for online processing. Experimental results on AFM data confirm that the performance of this classifier is robust and reliable.
机译:图像处理技术为生物医学研究带来了新的见识。生物医学对象的自动识别和分类可以提高工作效率,同时还能识别出生物学特征之间的新相互关系。在这项工作中,开发了一种基于规则的简单决策树分类器,以对通过原子力显微镜(AFM)研究的混合细胞类型的典型特征进行分类。从AFM数据中提取了连续小波变换(CWT)和基于矩的特征的组合,以表示多个分辨率级别上不同蜂窝对象的形状信息。这些特征在平移,旋转和缩放操作下显示为不变的。然后,将这些特征用于基于规则的简单分类器中,以区分无核和有核细胞类型,或将细胞与纤维状环境(例如组织支架或固定)区分开。由于每个特征都有明确的物理含义,因此该树分类器的决策规则很简单,非常适合在线处理。关于AFM数据的实验结果证实了该分类器的性能稳定可靠。

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