首页> 美国卫生研究院文献>Journal of Biomolecular Techniques : JBT >Quantifying Histological Features of Cancer Biospecimens for Biobanking Quality Assurance Using Automated Morphometric Pattern Recognition Image Analysis Algorithms
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Quantifying Histological Features of Cancer Biospecimens for Biobanking Quality Assurance Using Automated Morphometric Pattern Recognition Image Analysis Algorithms

机译:使用自动形态计量模式识别图像分析算法量化用于生物银行质量保证的癌症生物标本的组织学特征

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摘要

Biorepository-supported translational research depends on high-quality, well-annotated specimens. Histopathology assessment contributes insight into how representative lesions are for research objectives. Feasibility of documenting histological proportions of tumor and stroma was studied in an effort to enhance information regarding biorepository tissue heterogeneity. Using commercially available software, unique spatial-spectral algorithms were developed for applying automated pattern recognition morphometric image analysis to quantify histologic tumor and nontumor tissue areas in biospecimen tissue sections. Measurements were acquired successfully for 75/75 (100%) lymphomas, 76/77 (98.7%) osteosarcomas, and 60/70 (85.7%) melanomas. The percentage of tissue area occupied by tumor varied among patients and tumor types and was distributed around medians of 94% [interquartile range (IQR)=14%] for lymphomas, 84% for melanomas (IQR=24%), and 39% for osteosarcomas (IQR=44%). Within-patient comparisons from a subset, including multiple individual patient specimens, revealed ≤12% median coefficient of variation (CV) for lymphomas and melanomas. Phenotypic heterogeneity of osteosarcomas resulted in 33% median CV. Uniformly applied, tumor-specific pattern recognition software permits automated tissue-feature quantification. Furthermore, dispersion analyses of area measurements across collections, as well as of multiple specimens from individual patients, support using limited tissue slices to gauge features for some tumor types. Quantitative image analysis automation is anticipated to minimize variability associated with routine biorepository pathologic evaluations and enhance biomarker discovery by helping to guide the selection of study-appropriate specimens.
机译:生物存储库支持的翻译研究取决于高质量,注释充分的标本。组织病理学评估有助于洞悉代表性病变如何达到研究目的。为了增强有关生物存储库组织异质性的信息,研究了记录肿瘤和基质组织学比例的可行性。使用可商购的软件,开发了独特的空间光谱算法,用于应用自动模式识别形态计量图像分析来量化生物样本组织切片中的组织学肿瘤和非肿瘤组织区域。成功获得了75/75(100%)淋巴瘤,76/77(98.7%)骨肉瘤和60/70(85.7%)黑色素瘤的测量值。肿瘤所占的组织面积百分比随患者和肿瘤类型的不同而不同,分布在淋巴瘤的中位数分别为94%[四分位间距(IQR)= 14%],黑素瘤84%(IQR = 24%)和39%骨肉瘤(IQR = 44%)。从一个子集(包括多个患者样本)进行的患者内比较显示,淋巴瘤和黑色素瘤的中位变异系数(CV)≤12%。骨肉瘤的表型异质性导致CV中值占33%。统一应用的肿瘤特异性模式识别软件可实现组织特征的自动定量。此外,跨集合的面积测量以及来自单个患者的多个标本的分散分析支持使用有限的组织切片来测量某些肿瘤类型的特征。通过帮助指导选择适合研究的标本,定量图像分析自动化有望将与常规生物库病理学评估相关的可变性降至最低,并增强生物标志物的发现。

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