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Large‐scale transcriptome profiles reveal robust 20‐signatures metabolic prediction models and novel role of G6PC in clear cell renal cell carcinoma

机译:大规模转录组简档揭示了强大的20签名代谢预测模型和G6PC在透明细胞肾细胞癌中的新作用

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摘要

Clear cell renal cell carcinoma (ccRCC) is the most common and highly malignant pathological type of kidney cancer. We sought to establish a metabolic signature to improve post‐operative risk stratification and identify novel targets in the prediction models for ccRCC patients. A total of 58 metabolic differential expressed genes (MDEGs) were identified with significant prognostic value. LASSO regression analysis constructed 20‐mRNA signatures models, metabolic prediction models (MPMs), in ccRCC patients from two cohorts. Risk score of MPMs significantly predicts prognosis for ccRCC patients in TCGA ( P = 0.046, HR = 2.893, AUC = 0.777). In addition, , a hub gene in PPI network of MPMs, shows significantly prognostic value in 718 ccRCC patients from multiply cohorts. Next, G6Pase was detected high expressed in normal kidney tissues than ccRCC tissues. It suggested that low G6Pase expression significantly correlated with poor prognosis ( P G6PC was significantly higher in ccRCC samples with aggressive progression status. significantly participates in abnormal immune infiltration of ccRCC microenvironment, showing significantly negative association with check‐point immune signatures, dendritic cells, Th1 cells, etc. In conclusion, this study first provided the opportunity to comprehensively elucidate the prognostic MDEGs landscape, established novel prognostic model MPMs using large‐scale ccRCC transcriptome data and identified G6PC as potential prognostic target in 1,040 ccRCC patients from multiply cohorts. These finding could assist in managing risk assessment and shed valuable insights into treatment strategies of ccRCC.
机译:透明细胞肾细胞癌(CCRCC)是最常见的肾癌最常见和高度恶性的病理类型。我们试图建立代谢签名,以改善术后风险分层,并在CCRCC患者的预测模型中识别新的靶标。通过显着预后值鉴定总共58种代谢差异表达基因(MDEG)。套索回归分析构建了来自两个队列的CCRCC患者的20-mRNA签名模型,代谢预测模型(MPMS)。 MPMS风险评分显着预测TCGA中CCRCC患者的预后(P = 0.046,HR = 2.893,AUC = 0.777)。此外,PPI网络中的HUB基因在MPM的PPI网络中显示出718名CCRCC患者的显着预后价值来自繁殖队列。接下来,在正常的肾组织中检测到高于CCRCC组织的高肾上腺酶。它表明,与预后差的低G6Pase表达显着相关(P6PPC在CCRCC样品中具有侵袭性进展状态显着高。显着参与CCRCC微环境的异常免疫浸润,显示出与检查点免疫签名,树突细胞,TH1显着负关联。结论,本研究首先提供了机会,全面阐明了预后的MDEGS景观,使用大规模CCRCC转录组数据建立了新的预后模型MPM,并将G6PC鉴定为来自繁殖队的1,040名CCRCC患者中的潜在预后靶标。这些发现可以协助管理风险评估,并阐明有价值的见解融入CCRCC的治疗策略。

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