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Quorum Sensing Communication Modules for Microbial Consortia

机译:微生物联盟的群体感应通信模块

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摘要

The power of a single engineered organism is limited by its capacity for genetic modification. To circumvent the constraints of any singular microbe, a new frontier in synthetic biology is emerging: synthetic ecology, or the engineering of microbial consortia. Here we develop communication systems for such consortia in an effort to allow for complex social behavior across different members of a community. We posit that such communities will outpace monocultures in their ability to perform complicated tasks if communication among and between members of the community is well regulated. Quorum sensing was identified as the most promising candidate for precise control of engineered microbial ecosystems, due to its large diversity and established utility in synthetic biology. Through promoter and protein modification, we engineered two quorum sensing systems (rpa and tra) to add to the extensively used lux and las systems. By testing the cross-talk between all systems, we thoroughly characterized many new inducible systems for versatile control of engineered communities. Furthermore, we’ve identified several system pairs that exhibit useful types of orthogonality. Most notably, the tra and rpa systems were shown to have neither signal crosstalk nor promoter crosstalk for each other, making them completely orthogonal in operation. Overall, by characterizing the interactions between all four systems and their components, these circuits should lend themselves to higher-level genetic circuitry for use in microbial consortia.
机译:单个工程生物的能力受到其基因修饰能力的限制。为了规避任何单一微生物的限制,合成生物学的新领域正在出现:合成生态学或微生物联合体的工程设计。在这里,我们开发了针对此类财团的通信系统,以允许社区中不同成员之间的复杂社会行为。我们假设,如果社区成员之间和社区之间的沟通受到良好的监管,那么它们在执行复杂任务方面的能力将超过单一文化。群体感应被认为是精确控制工程微生物生态系统的最有希望的候选者,这是因为群体感应的多样性和在合成生物学中的广泛应用。通过启动子和蛋白质修饰,我们设计了两个群体感应系统(rpa和tra),以添加到广泛使用的lux和las系统中。通过测试所有系统之间的串扰,我们彻底表征了许多新的可诱导系统,以对工程社区进行多功能控制。此外,我们已经确定了几对具有有用正交性的系统对。最值得注意的是,tra和rpa系统显示为彼此既没有信号串扰也没有启动子串扰,从而使它们在操作中完全正交。总体而言,通过表征所有四个系统及其组件之间的相互作用,这些电路应适合微生物菌群使用的高级遗传电路。

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