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De novo male gonad transcriptome draft for the marine mussel Perumytilus purpuratus with a focus on its reproductive-related proteins

机译:海洋贻贝红斑紫癜的新男性生殖腺转录组草图重点研究其生殖相关蛋白

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摘要

Perumytilus purpuratus is a marine mussel considered a bioengineer species with a broad distribution in the Pacific and Atlantic coast of South America. Studies have shown two geographically and genetically differentiated subpopulations at molecular level and in sperm morphological traits. To open avenues for molecular research on P. purpuratus, a global de novo transcriptome from gonadal tissue of mature males was sequenced using the Illumina platform. From a total of 126.38 million reads, 37,765 transcripts were successfully annotated. BUSCO analysis determined a level of 89% completeness for the assembled transcriptome. The functional gene ontology (GO) annotation indicated that, in terms of abundance, the transcripts related with molecular function were the most represented, followed by those related with biological process and cellular components. Additionally, a subset of GO annotations generated using the “sperm” term resulted in a total of 1,294 sequences where the biological process category was the more represented, with transcripts strongly associated to sperm-processes required for fertilization, and with processes where the sperm-egg interaction could be implicated.Our work will contribute to the evolutionary understanding of the molecular mechanisms related to tissue-specific functions. This work reports the first male gonad transcriptome for the mussel P. purpuratus, generating a useful transcriptomic resource for this species and other closely related mytilids.
机译:紫贻贝是一种海洋贻贝,被认为是生物工程物种,在南美的太平洋和大西洋沿岸分布广泛。研究表明,在分子水平和精子形态学特征上存在两个地理和遗传上不同的亚群。为了为紫癜疟原虫的分子研究开辟道路,使用Illumina平台对来自成熟雄性性腺组织的全球从头转录组进行了测序。在总计1.238亿次阅读中,成功注释了37,765个成绩单。 BUSCO分析确定组装的转录组的完整性水平为89%。功能基因本体论(GO)注释表明,就数量而言,与分子功能有关的转录本最多,其次是与生物学过程和细胞成分有关的那些转录本。此外,使用“精子”一词生成的GO注释子集导致共有1,294个序列,其中生物过程类别的代表性最高,转录本与受精所需的精子过程密切相关,而精子过程可能涉及卵的相互作用。我们的工作将有助于对与组织特定功能有关的分子机制的进化理解。这项工作报告了贻贝紫斑病菌的第一个雄性腺转录组,为该物种和其他紧密相关的Mytilids产生了有用的转录组资源。

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