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Comparative phylogeographic study of Hosta sieboldiana and Hosta albomarginata (Asparagaceae) in Japan

机译:日本的Hosta sieboldiana和Hosta albomarginata(Asparagaceae)的比较系统地理学研究

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摘要

We analyzed variations in chloroplast DNA (cpDNA) in the widespread herbaceous species Hosta sieboldiana and Hosta albomarginata across large portions of their geographic ranges in the Japanese archipelago. Our objective was to compare the phylogeographic histories and phylogeographic structures of the two congeneric species in the Japanese archipelago. The location of the study is Japanese archipelago. We sequenced 1380 bp of noncoding cpDNA from 45 populations of H. sieboldiana (n = 362) and 55 populations of H. albomarginata (n = 436) to assess genetic variations within and among populations across almost the entire distributions of the species in Japan. Extant patterns of geographic structure were analyzed using statistical parsimony networks and spatial analysis of molecular variance (SAMOVA). We also used Monmonier's algorithm to detect genetic barriers between regions. Relationships between the populations were examined using a neighbor-joining (NJ) method. Four haplotypes were found for H. sieboldiana, whereas eight haplotypes were identified for H. albomarginata. Total genetic haplotype diversity (hT) and within-population haplotype diversity (hS) for H. sieboldiana were 0.352 and 0.040, respectively, while the values for H. albomarginata were 0.529 and 0.085, respectively. The population differentiations (GST) for H. sieboldiana and H. albomarginata were 0.839 and 0.886, respectively. The SAMOVA analysis revealed two clusters in H. sieboldiana and four clusters in H. albomarginata. Differentiations between and among the clusters were supported by the BARRIER analysis and the NJ tree. We detected differences in the population genetic structure between the two species. We found that H. sieboldiana had lower haplotype diversity than H. albomarginata. These results may be partially explained by the difference in ecological habitats and geographic distributions between the species. Hosta albomarginata is more widely distributed than H. sieboldiana in East Asia including Russia, and this large distribution range would enable more chances to intraspecific gene flow.
机译:我们分析了日本群岛中广泛分布的草本物种Hosta sieboldiana和Hosta albomarginata中叶绿体DNA(cpDNA)的变异,这些变异遍及它们的地理区域的大部分。我们的目的是比较日本群岛上两个同类物种的系统地理学历史和系统结构。研究的地点是日本群岛。我们对来自45个sieboldiana种群(n = 362)和55个albomarginata种群(n = 436)的1380 bp非编码cpDNA进行了测序,以评估日本几乎整个物种分布中种群内部和种群之间的遗传变异。使用统计简约网络和分子变异空间分析(SAMOVA)分析了现有的地理结构模式。我们还使用Monmonier算法检测区域之间的遗传障碍。使用邻居加入(NJ)方法检查人口之间的关系。 sieboldiana的四个单倍型,而albomarginata的八个单倍型。西伯利亚H.sieboldiana的总遗传单倍型多样性(hT)和种群内单倍型多样性(hS)分别为0.529和0.085,而白线H. albomarginata的值分别为0.529和0.085。西伯利亚H. sieboldiana和 H 的种群分化(GST)。 albomarginata 分别为0.839和0.886。 SAMOVA分析显示 H中有两个簇。 sieboldiana H中的四个簇。 albomarginata 。 BARRIER分析和NJ树支持集群之间的区分。我们检测到两个物种之间的种群遗传结构存在差异。我们发现 H。 sieboldiana 的单倍型多样性低于 H。 albomarginata 。这些结果可能部分由物种之间生态栖息地和地理分布的差异来解释。 Hosta albomarginata H 分布更广泛。 sieboldiana 在包括俄罗斯在内的东亚,如此大的分布范围将为种内基因流动提供更多机会。

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