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Strategies for optimizing the phase correction algorithms in Nuclear MagneticResonance spectroscopy

机译:优化核磁相位校正算法的策略共振光谱

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摘要

Nuclear Magnetic Resonance (NMR) spectroscopy is a popular medical diagnostic technique. NMR is also the favourite tool of chemists/biochemists to elucidate the molecular structure of small or big molecules; it is also a widely used tool in material science, in food science etc. In the case of medical diagnosis it allows for determining a metabolic composition of analysed tissue which may support the identification of tumour cells. Precession signal, that is a crucial part of MR phenomenon, contains distortions that must be filtered out before signal analysis. One of such distortions is phase error.Five popular algorithms: Automics, Shanon's entropy minimization, Ernst's method, Dispa and eDispa are presented and discussed. A novel adaptive tuning algorithm for Automics method was developed and numerically optimal solutions to automatic tuning of the other four algorithms were proposed. To validate the performance of the proposed techniques, two experiments were performed - the first one was done with the use of in silico generated data. For all presented methods, the fine tuning strategies significantly increased the correction accuracy. The highest improvement was observed for Automics algorithm, independently of noise level, with relative phase error dropping by average from 10.25% to 2.40% for low noise level and from 12.45% to 2.66% for high noise level. The second validation experiment, done with theuse of phantom data, confirmed the in silico results. The obtained accuracyof the estimation of metabolite concentration was at 99.5%.ConclusionsThe proposed strategies for optimizing the phase correction algorithmssignificantly improve the accuracy of Nuclear Magnetic Resonance spectroscopysignal analysis.
机译:核磁共振(NMR)光谱是一种流行的医学诊断技术。 NMR还是化学家/生物化学家常用的阐明小分子或大分子分子结构的工具。它也是材料科学,食品科学等领域中广泛使用的工具。在医学诊断的情况下,它允许确定被分析组织的代谢成分,这可能有助于鉴定肿瘤细胞。进动信号是MR现象的重要部分,其中包含必须在信号分析之前滤除的失真。其中一种失真是相位误差。提出并讨论了5种流行的算法:Automics,Shanon的熵最小化,Ernst方法,Dispa和eDispa。提出了一种新颖的Automics自适应调整算法,并提出了其他四种算法自动调整的数值最优解。为了验证所提出技术的性能,进行了两个实验-第一个实验是使用计算机生成的数据完成的。对于所有提出的方法,微调策略显着提高了校正精度。 Automics算法获得了最高的改进,与噪声水平无关,相对相位误差从低噪声水平平均降低了10.25%至2.40%,从高噪声水平平均降低了12.45%至2.66%。第二个验证实验利用幻象数据,证实了计算机模拟结果。获得的精度代谢物浓度的估计值为99.5%。结论提出的优化相位校正算法的策略大大提高了核磁共振波谱的准确性信号分析。

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