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A CoD-based stationary control policy for intervening in large gene regulatory networks

机译:基于CoD的固定控制策略用于干预大型基因调控网络

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摘要

BackgroundOne of the most important goals of the mathematical modeling of gene regulatory networks is to alter their behavior toward desirable phenotypes. Therapeutic techniques are derived for intervention in terms of stationary control policies. In large networks, it becomes computationally burdensome to derive an optimal control policy. To overcome this problem, greedy intervention approaches based on the concept of the Mean First Passage Time or the steady-state probability mass of the network states were previously proposed. Another possible approach is to use reduction mappings to compress the network and develop control policies on its reduced version. However, such mappings lead to loss of information and require an induction step when designing the control policy for the original network.
机译:背景技术基因调控网络数学建模的最重要目标之一是将其行为改变为理想的表型。从固定控制策略的角度出发,得出了用于干预的治疗技术。在大型网络中,获得最佳控制策略在计算上变得繁重。为了克服这个问题,先前提出了基于平均首次通过时间或网络状态的稳态概率质量的贪婪干预方法。另一种可能的方法是使用缩减映射来压缩网络并针对其缩减版本开发控制策略。但是,这样的映射导致信息丢失,并且在为原始网络设计控制策略时需要一个归纳步骤。

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