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Definition and Estimation of Higher-Order Gene Fixation Indices

机译:高阶基因固定指数的定义和估计

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摘要

Fixation indices summarize the associations between genes that arise from the joint effects of inbreeding and selection. In this paper, fixation indices are derived for pairs, triplets and quadruplets of genes at a single multiallelic locus. The fixation indices are obtained by dividing cumulants by constants; the cumulants describe the statistical distribution of alleles and the constants are functions of gene frequency. The use of cumulants instead of moments is necessary only for four-gene indices, when the fourth cumulant is used. A second type of four-gene index is also required, and this index is based upon the covariation of second-order cumulants. At multiallelic loci, a large number of indices is possible. If alleles are selectively neutral, the number of indices is reduced and the relationship between gene identity and gene cumulants is shown.—Two-gene indices can always be estimated from genotypic frequency data at a single polymorphic locus. Three-gene indices are also estimable except when allele frequency equals one-half. Four-gene indices are not estimable unless selection is assumed to have an equal effect upon each allele (such as under selective neutrality) and the locus contains at least three alleles of unequal frequency. For diallelic or selected loci, an alternative four-gene fixation index is proposed. This index incorporates both types of four-gene associations but cannot be related to gene identity.
机译:固定指数总结了由近交和选择的联合效应产生的基因之间的关联。在本文中,在单个多等位基因位点上获得了基因对,三联体和四联体的固定指数。固定指数是通过将累积量除以常数获得的。累积量描述了等位基因的统计分布,常数是基因频率的函数。当使用第四个累积量时,只有四基因索引才需要使用累积量而不是矩。还需要第二种类型的四基因索引,并且该索引基于二阶累积量的协变。在多等位基因座上,大量索引是可能的。如果等位基因是选择性中性的,则索引的数目会减少,并且会显示基因同一性与基因累积量之间的关系。—始终可以从单个多态性位点的基因型频率数据中估算出两个基因的索引。除了等位基因频率等于二分之一时,三基因指数也是可以估计的。除非假定选择对每个等位基因具有相同的影响(例如在选择性中性条件下)并且基因座包含至少三个频率不等的等位基因,否则无法估计四基因指数。对于二元或选定的基因座,提出了另一种四基因固定指数。该指数结合了两种类型的四基因关联,但与基因同一性无关。

著录项

  • 期刊名称 Genetics
  • 作者

    Kermit Ritland;

  • 作者单位
  • 年(卷),期 1987(117),4
  • 年度 1987
  • 页码 783–793
  • 总页数 11
  • 原文格式 PDF
  • 正文语种
  • 中图分类 遗传学;
  • 关键词

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