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Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci

机译:全基因组筛选的基因剂量效应用于鉴定海藻分枝杆菌巨噬细胞感染基因座的用途

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摘要

We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity.
机译:我们最近确定了两个基因座mel1和mel2,它们影响了海洋分枝杆菌对巨噬细胞的感染。这些基因座赋予反式增强感染的能力大概是由于基因剂量的影响,因为它们在质粒上的存在使表达增加了五倍至八倍。认为该现象可以识别参与巨噬细胞感染的其他分枝杆菌基因,我们进行了海藻分枝杆菌DNA文库的筛选,该文库对影响巨噬细胞感染的克隆提供了全基因组2.6倍的覆盖率。我们的初步筛选确定了76个质粒,它们携带有影响巨噬细胞感染的基因座。从进一步考虑中,我们消除了在重新转化时不赋予预期表型的质粒(70%),具有相同的物理图谱(5%)或带有mel1或mel2基因座的质粒(14%)。确定了赋予巨噬细胞增强感染(mel)的四个基因座和赋予巨噬细胞抑制感染(mrl)的四个基因座,每组选择两个进行详细分析。使用饱和转座子诱变来鉴定负责的基因座,并在涉及的基因中构建海藻分枝杆菌突变体。我们希望这些基因能够提供有关分枝杆菌如何寄生于巨噬细胞(固有免疫的重要组成部分)的真知灼见。

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