首页> 美国卫生研究院文献>Acta Crystallographica Section F: Structural Biology and Crystallization Communications >A comprehensive review of the lipid cubic phase or in meso method for crystallizing membrane and soluble proteins and complexes
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A comprehensive review of the lipid cubic phase or in meso method for crystallizing membrane and soluble proteins and complexes

机译:脂质立方相或内消旋方法结晶膜和可溶性蛋白质及复合物的全面综述

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摘要

The lipid cubic phase or in meso method is a robust approach for crystallizing membrane proteins for structure determination. The uptake of the method is such that it is experiencing what can only be described as explosive growth. This timely, comprehensive and up-to-date review introduces the reader to the practice of in meso crystallogenesis, to the associated challenges and to their solutions. A model of how crystallization comes about mechanistically is presented for a more rational approach to crystallization. The possible involvement of the lamellar and inverted hexagonal phases in crystallogenesis and the application of the method to water-soluble, monotopic and lipid-anchored proteins are addressed. How to set up trials manually and automatically with a robot is introduced with reference to open-access online videos that provide a practical guide to all aspects of the method. These range from protein reconstitution to crystal harvesting from the hosting mesophase, which is noted for its viscosity and stickiness. The sponge phase, as an alternative medium in which to perform crystallization, is described. The compatibility of the method with additive lipids, detergents, precipitant-screen components and materials carried along with the protein such as denaturants and reducing agents is considered. The powerful host and additive lipid-screening strategies are described along with how samples that have low protein concentration and cell-free expressed protein can be used. Assaying the protein reconstituted in the bilayer of the cubic phase for function is an important element of quality control and is detailed. Host lipid design for crystallization at low temperatures and for large proteins and complexes is outlined. Experimental phasing by heavy-atom derivatization, soaking or co-crystallization is routine and the approaches that have been implemented to date are described. An overview and a breakdown by family and function of the close to 200 published structures that have been obtained using in meso-grown crystals are given. Recommendations for conducting the screening process to give a more productive outcome are summarized. The fact that the in meso method also works with soluble proteins should not be overlooked. Recent applications of the method for in situ serial crystallography at X-ray free-electron lasers and synchrotrons are described. The review ends with a view to the future and to the bright prospects for the method, which continues to contribute to our understanding of the molecular mechanisms of some of nature’s most valued proteinaceous robots.
机译:脂质立方相或内消旋方法是使膜蛋白结晶以确定结构的可靠方法。该方法的采用使得它正在经历只能描述为爆炸性增长的过程。这篇及时,全面和最新的评论向读者介绍了介观晶体形成的实践,相关的挑战及其解决方案。为了更合理地进行结晶,提出了一种结晶机制的模型。讨论了层状相和倒六角相在晶体形成中的可能参与以及该方法在水溶性,单分子和脂质锚定蛋白中的应用。介绍了如何使用机器人手动和自动设置试验,并参考开放获取的在线视频,这些视频为该方法的各个方面提供了实用指南。这些范围从蛋白质重建到宿主中间相的晶体收获,其粘度和粘性均得到了体现。描述了海绵相,作为其中进行结晶的替代介质。考虑到该方法与添加剂脂质,去污剂,沉淀剂筛分成分以及与蛋白质一起携带的材料(例如变性剂和还原剂)的兼容性。描述了强大的宿主和添加剂脂质筛选策略,以及如何使用具有低蛋白浓度和无细胞表达蛋白的样品。测定在立方相的双层中重构的蛋白质的功能是质量控制的重要要素,并且将对其进行详细说明。概述了用于低温结晶以及大型蛋白质和复合物的宿主脂质设计。通常通过重原子衍生化,均热或共结晶进行实验定相,并描述了迄今为止已实现的方法。给出了概述和按族和功能分类的近200种已公开的结构,这些结构已在中观生长的晶体中获得。总结了进行筛选过程以产生更丰硕成果的建议。介观方法也适用于可溶性蛋白的事实不容忽视。描述了在X射线自由电子激光器和同步加速器上进行原位串联晶体学的方法的最新应用。审查的目的是展望该方法的未来和光明的前景,这将继续有助于我们对一些自然界最有价值的蛋白质机器人的分子机制的理解。

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