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Development of Accelerated Raman Scattering and Fluorescent Monte Carlo Model

机译:加速拉曼散射和荧光蒙特卡洛模型的发展

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Monte Carlo (MC) modeling of photon propagation in turbid media is an essential tool for understanding optical interactions between light and tissue. Insight gathered from outputs of MC models assists in mapping between detected optical signals and bulk tissue optical properties, and as such, has proven useful for inverse calculations of tissue composition and optimization of the design of optical probes. MC models of Raman scattering have previously been implemented without consideration to background autofluorescence, despite its presence in raw measurements. Modeling both Raman and fluorescence profiles at high spectral resolution requires a significant increase in computation, but is more appropriate for investigating issues such as detection limits. We present a new Raman Fluorescence MC model developed atop an existing GPU parallelized MC framework that can run more than 300x times faster than CPU methods. The robust acceleration allows for the efficient production of both Raman and fluorescence outputs from the MC model. In addition, this model can handle arbitrary sample morphologies of excitation and collection geometries to more appropriately mimic experimental settings. We will present the model framework and initial results.
机译:蒙特卡洛(MC)对光子在混浊介质中传播的建模是了解光与组织之间光学相互作用的重要工具。从MC模型的输出中收集的洞察力有助于在检测到的光信号与大块组织光学特性之间进行映射,因此,事实证明,这对组织组成的逆计算和光学探头设计的优化非常有用。尽管在原始测量中存在拉曼散射的MC模型,但以前并未考虑背景自发荧光就实现了该模型。以高光谱分辨率对拉曼光谱和荧光光谱进行建模需要大量增加计算量,但更适合于研究诸如检测限之类的问题。我们提出了在现有GPU并行化MC框架上开发的新拉曼荧光MC模型,其运行速度比CPU方法快300倍以上。强劲的加速度可有效产生MC模型的拉曼和荧光输出。此外,该模型可以处理激发和收集几何形状的任意样本形态,以更适当地模拟实验设置。我们将介绍模型框架和初步结果。

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