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Fast and Precise 3D Fluorophore Localization by Gradient Fitting

机译:通过梯度拟合快速精确地进行3D荧光团定位

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摘要

Astigmatism imaging is widely used to encode the 3D position of fluorophore in single-particle tracking and super-resolution localization microscopy. Here, we present a fast and precise localization algorithm based on gradient fitting to decode the 3D subpixel position of the fluorophore. This algorithm determines the center of the emitter by finding the position with the best-fit gradient direction distribution to the measured point spread function (PSF), and can retrieve the 3D subpixel position of the emitter in a single iteration. Through numerical simulation and experiments with mammalian cells, we demonstrate that our algorithm yields comparable localization precision to the traditional iterative Gaussian function fitting (GF) based method, while exhibits over two orders-of-magnitude faster execution speed. Our algorithm is a promising online reconstruction method for 3D super-resolution microscopy.
机译:散光成像被广泛用于在单粒子跟踪和超分辨率定位显微镜中对荧光团的3D位置进行编码。在这里,我们提出一种基于梯度拟合的快速,精确的定位算法,以对荧光团的3D子像素位置进行解码。该算法通过找到与测量点扩展函数(PSF)具有最佳拟合梯度方向分布的位置来确定发射器的中心,并且可以在一次迭代中检索发射器的3D子像素位置。通过数值模拟和对哺乳动物细胞的实验,我们证明了我们的算法与传统的基于迭代高斯函数拟合(GF)的方法相比具有可比的定位精度,同时展现出超过两个数量级的更快执行速度。我们的算法是用于3D超分辨率显微镜的有前途的在线重建方法。

著录项

  • 来源
  • 会议地点 San Francisco CA(US)
  • 作者单位

    Biomedical and Optical Imaging Laboratory, Departments of Medicine and Bioengineering, University of Pittsburgh, Pittsburgh PA 15213, USA;

    Biomedical and Optical Imaging Laboratory, Departments of Medicine and Bioengineering, University of Pittsburgh, Pittsburgh PA 15213, USA;

    Biomedical and Optical Imaging Laboratory, Departments of Medicine and Bioengineering, University of Pittsburgh, Pittsburgh PA 15213, USA ,School of Medicine, Tsinghua University, China;

    School of Medicine, Tsinghua University, China ,Department of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh PA 15213, USA;

    Department of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh PA 15213, USA;

    Biomedical and Optical Imaging Laboratory, Departments of Medicine and Bioengineering, University of Pittsburgh, Pittsburgh PA 15213, USA;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Astigmatism imaging; Single-particle tracking; Super-resolution localization microscopy; 3D localization; Gradient Fitting;

    机译:散光成像;单粒子跟踪;超分辨率定位显微镜; 3D本地化;梯度拟合;

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