首页> 外文会议>Pacific Symposium on Biocomputing 2007 >EVALUATING THE AUTOMATIC MAPPING OF HUMAN GENE AND PROTEIN MENTIONS TO UNIQUE IDENTIFIERS
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EVALUATING THE AUTOMATIC MAPPING OF HUMAN GENE AND PROTEIN MENTIONS TO UNIQUE IDENTIFIERS

机译:评估人类基因和蛋白质提及到唯一标识符的自动映射

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摘要

We have developed a challenge task for the second BioCreAtlvE (Critical Assessment of Information Extraction in Biology) that requires participating systems to provide lists of the EntrezGene (formerly LocusLink) identifiers for all human genes and proteins mentioned in a MEDLINE abstract. We are distributing 281 annotated abstracts and another 5,000 noisily annotated abstracts along with a gene name lexicon to participants. We have performed a series of baseline experiments to better characterize this dataset and form a foundation for participant exploration.
机译:我们已经为第二个BioCreAtlvE(生物学信息提取的关键评估)制定了一项挑战性任务,该任务要求参与系统提供MEDLINE摘要中提及的所有人类基因和蛋白质的EntrezGene(以前称为LocusLink)标识符的列表。我们将向参与者分发281个带注释的摘要和另外5,000个带噪声的摘要以及一个基因名称词典。我们进行了一系列基准实验,以更好地表征该数据集并为参与者探索打下基础。

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