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Development of an in situ magnetic beads based RT-PCR method for electrochemiluminescent detection of rotavirus

机译:基于原位磁珠的RT-PCR方法轮状病毒电化学发光检测方法的建立

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Rotaviruses are double-stranded RNA viruses belonging to the family of enteric pathogens. It is a major cause of diarrhoeal disease in infants and young children worldwide. Consequently, rapid and accurate detection of rotaviruses is of great importance in controlling and preventing food- and waterborne diseases and outbreaks. Reverse transcription-polymerase chain reaction (RT-PCR) is a reliable method that possesses high specificity and sensitivity. It has been widely used to detection of viruses. Electrochemiluminescence (ECL) can be considered as an important and powerful tool in analytical and clinical application with high sensitivity, excellent specificity, and low cost. Here we have developed a method for the detection of rotavirus by combining in situ magnetic beads (MBs) based RT-PCR with ECL. RT of rotavirus RNA was carried out in a traditional way and the resulting cDNA was directly amplified on MBs. Forward primers were covalently bounded to MBs and reverse primers were labeled with tris-(2, 2'-bipyridyl) ruthenium (TBR). During the PCR cycling, the TBR labeled products were directly loaded and enriched on the surface of MBs. Then the MBs-TBR complexes could be analyzed by a magnetic ECL platform without any post-modification or post-incubation, which avoid some laborious manual operations and achieve rapid yet sensitive detection. In this study, rotavirus from fecal specimens was successfully detected within 2 h, and the limit of detection was estimated to be 10~4copies/μL. This novel in situ MBs based RT-PCR with ECL detection method can be used for pathogen detection in food safety field and clinical diagnosis.
机译:轮状病毒是属于肠道病原体家族的双链RNA病毒。它是全世界婴幼儿腹泻病的主要原因。因此,快速准确地检测轮状病毒在控制和预防食源性和水传播性疾病及暴发中具有重要意义。逆转录聚合酶链反应(RT-PCR)是一种具有高特异性和敏感性的可靠方法。它已被广泛用于检测病毒。电化学发光(ECL)可以被认为是分析和临床应用中重要且功能强大的工具,具有高灵敏度,出色的特异性和低成本。在这里,我们开发了一种通过结合基于原位磁珠(MBs)的RT-PCR和ECL来检测轮状病毒的方法。轮状病毒RNA的RT采用传统方法进行,所得cDNA直接在MBs上扩增。正向引物与MBs共价结合,反向引物用tris-(2,2'-联吡啶基)钌(TBR)标记。在PCR循环过程中,将TBR标记的产物直接上样并富集在MBs表面。然后可以通过磁性ECL平台分析MBs-TBR复合物,而无需进行任何后修饰或后孵育,从而避免了繁琐的人工操作并实现了快速而灵敏的检测。在这项研究中,成功​​地在2小时内检测到了粪便标本中的轮状病毒,检测限估计为10〜4拷贝/μL。这种基于原位MBs的RT-PCR结合ECL检测方法可用于食品安全领域的病原体检测和临床诊断。

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