Comparison of structural and statistical characteristics of interfering GB speckles, generated for the nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus and Sheeppox Virus

摘要

GB-speckles (gene-based speckles) have been generated for two nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus and Sheeppox Virus. Statistical properties of the interfering GB-speckles have been studied. It have been demonstrated that a structure of the interference speckle patterns is very sensitive to the presence of very small differences between the comparing nucleotide sequences. Case of a formation of evident interferential fringes in resulting picture (superposition of two GB-speckle patterns) has been analyzed in details. It has been demonstrated that an application of the GB-speckles, generated on the target virus nucleotide sequences has the great perspectives from viewpoint of modern bioinformatics.