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A Bio-inspired Optimization Algorithm for Modeling the Dynamics of Biological Systems

机译:一种模拟生物系统动力学的生物启发优化算法

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A new approach to meta-heuristic bat search optimization algorithm is developed. The fine balance between intensification (exploitation) and diversification (exploration) is very important to the overall efficiency and performance of a meta-heuristic search algorithm. Too little exploration and too much exploitation could cause the system to be trapped in local optima, which makes it very difficult or even impossible to find the global optimum. The track of chaotic variable can travel ergodically over the whole search space. In general, the chaotic variable has special characters, i.e., ergodicity, pseudo-randomness and irregularity. To enrich the searching behavior and to avoid being trapped into local optimum, chaotic sequence and a chaotic Levy flight are incorporated in the meta-heuristic search for efficiently generating new solutions. In this paper, we describe a general methodology to adaptively select the values of the model parameters for the reconstruction of biological system dynamics. We illustrate the application of the method by jointly estimating the parameter vector of the dynamics of endocytosis.
机译:开发了一种新的荟萃启发式BAT搜索优化算法方法。强化(剥削)和多样化(勘探)之间的细平衡对元启发式搜索算法的整体效率和性能非常重要。太少的探索和太多的剥削可能导致系统被困在当地最佳状态,这使得这使得它非常困难甚至无法找到全球最佳。混沌变量的轨道可以在整个搜索空间上令人讨厌地行进。通常,混沌变量具有特殊的字符,即ergodicity,伪随机性和不规则性。为了丰富搜索行为并避免被困成局部最佳,混沌序列和混沌征集飞行中的荟萃启发式搜索,以有效地产生新的解决方案。在本文中,我们描述了一种普遍的方法,以便自适应地选择用于重建生物系统动态的模型参数的值。我们通过联合估计内吞作用的动态的参数向量来说明该方法的应用。

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