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Pix2Pix-based Stain-to-Stain Translation: A Solution for Robust Stain Normalization in Histopathology Images Analysis

机译:基于Pix2Pix的污点到污点翻译:组织病理学图像分析中可靠的污点归一化解决方案

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The diagnosis of cancer is mainly performed by visual analysis of the pathologists, through examining the morphology of the tissue slices and the spatial arrangement of the cells. If the microscopic image of a specimen is not stained, it will look colorless and textured. Therefore, chemical staining is required to create contrast and help identify specific tissue components. During tissue preparation due to differences in chemicals, scanners, cutting thicknesses, and laboratory protocols, similar tissues are usually varied significantly in appearance. This diversity in staining, in addition to Interpretive disparity among pathologists more is one of the main challenges in designing robust and flexible systems for automated analysis. To address the staining color variations, several methods for normalizing stain have been proposed. In our proposed method, a Stain-to-Stain Translation (STST) approach is used to stain normalization for Hematoxylin and Eosin (H&E) stained histopathology images, which learns not only the specific color distribution but also the preserves corresponding histopathological pattern. We perform the process of translation based on the "pix2pix" framework, which uses the conditional generator adversarial networks (cGANs). Our approach showed excellent results, both mathematically and experimentally against the state of the art methods. We have made the source code publicly available 1.
机译:癌症的诊断主要是通过对病理学家的视觉分析,通过检查组织切片的形态和细胞的空间排列来进行的。如果标本的显微图像未染色,它将看起来无色且有纹理。因此,需要化学染色来产生对比并帮助识别特定的组织成分。在组织准备过程中,由于化学药品,扫描仪,切割厚度和实验室规程的差异,相似组织通常在外观上有很大差异。除了在病理学家之间的解释差异外,这种染色多样性还为设计用于自动化分析的强大而灵活的系统带来了主要挑战之一。为了解决染色的颜色变化,已经提出了几种使染色标准化的方法。在我们提出的方法中,使用染色到染色翻译(STST)方法对苏木精和曙红(H&E)染色的组织病理学图像进行染色归一化,不仅可以学习特定的颜色分布,还可以学习相应的组织病理学模式。我们基于“ pix2pix”框架执行翻译过程,该框架使用条件生成器对抗网络(cGAN)。我们的方法在数学和实验上均与最先进的方法相对应,显示出极好的结果。我们已经公开了源代码 1

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