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A fully-automated software pipeline for integrating breast density and parenchymal texture analysis for digital mammograms: Parameter optimization in a case-control breast cancer risk assessment study

机译:一种全自动软件管线,用于整合乳房密度和实质乳房X线照片的实质乳房纹理分析:案例控制乳腺癌风险评估研究中的参数优化

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Estimating a woman's risk of breast cancer is becoming increasingly important in clinical practice. Mammographic density, estimated as the percent of dense (PD) tissue area within the breast, has been shown to be a strong risk factor. Studies also support a relationship between mammographic texture and breast cancer risk. We have developed a fully-automated software pipeline for computerized analysis of digital mammography parenchymal patterns by quantitatively measuring both breast density and texture properties. Our pipeline combines advanced computer algorithms of pattern recognition, computer vision, and machine learning and offers a standardized tool for breast cancer risk assessment studies. Different from many existing methods performing parenchymal texture analysis within specific breast sub-regions, our pipeline extracts texture descriptors for points on a spatial regular lattice and from a surrounding window of each lattice point, to characterize the local mammographic appearance throughout the whole breast. To demonstrate the utility of our pipeline, and optimize its parameters, we perform a case-control study by retrospectively analyzing a total of 472 digital mammography studies. Specifically, we investigate the window size, which is a lattice related parameter, and compare the performance of texture features to that of breast PD in classifying case-control status. Our results suggest that different window sizes may be optimal for raw (12.7mm~2) versus vendor post-processed images (6.3mm~2). We also show that the combination of PD and texture features outperforms PD alone. The improvement is significant (p=0.03) when raw images and window size of 12.7mm~2 are used, having an ROC AUC of 0.66. The combination of PD and our texture features computed from post-processed images with a window size of 6.3 mm2 achieves an ROC AUC of 0.75.
机译:估计女性乳腺癌的风险在临床实践中越来越重要。估计为乳房内的致密(Pd)组织区域的乳房X光密度已被证明是强烈的危险因素。研究还支持乳腺纹理和乳腺癌风险之间的关系。通过定量测量乳房密度和质地性能,我们开发了一种全自动的软件管道,用于数字乳房X线摄影实质图案。我们的管道结合了先进的计算机识别,计算机视觉和机器学习的计算机算法,并为乳腺癌风险评估研究提供了标准化工具。与许多现有方法不同,在特定乳房子区域内进行实质纹理分析,我们的管道提取用于空间常规格子的点的纹理描述符,以及从每个格点的周围窗口提取,以在整个乳房中表征局部乳房入住。为了展示我们的管道的效用,并优化其参数,我们通过回顾性分析了472个数字乳房X线摄影研究来执行案例控制研究。具体而言,我们研究了窗口大小,它是晶格相关参数,并将纹理特征的性能与乳房PD的分类控制状态进行比较。我们的结果表明,不同的窗口尺寸可能是原始的(12.7mm〜2)与供应商后处理图像(6.3mm〜2)的最佳状态。我们还表明,PD和纹理特征的组合单独占PD。当使用0.66的ROC AUC时,改善效果和窗口尺寸为12.7mm〜2的窗口尺寸是显着的(p = 0.03)。 PD的组合和从具有6.3mm2的窗口大小的后处理图像计算的纹理特征实现了0.75的ROC AUC。

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