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Benchmarking Quantitative Imaging Biomarker Measurement Methods Without a Gold Standard

机译:没有黄金标准的定量成像生物标记物基准测试方法

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Validation of quantitative imaging biomarker (QIB) measurement methods is generally based on the concept of a reference method, also called a gold standard (GS). Poor quality of the GS, for example due to inter- and intra-rater variabilities in segmentation, may lead to biased error estimates and thus adversely impact the validation. Herein we propose a novel framework for benchmarking multiple measurement methods without a GS. The framework consists of (i) an error model accounting for correlated random error between measurements extracted by the methods, (ii) a novel objective based on a joint posterior probability of the error model parameters (iii) Markov chain Monte Carlo to sample the posterior. Analysis of the posterior enables not only to estimate the error model parameters (systematic and random error) and thereby benchmark the methods, but also to estimate the unknown true values of QIB. Validation of the proposed framework on multiple sclerosis total lesion load measurements by four automated segmentation methods applied to a clinical brain MRI dataset showed a very good agreement of the error model and true value estimates with corresponding least squares estimates based on a known GS.
机译:定量成像生物标志物(QIB)测量方法的验证通常基于参考方法(也称为黄金标准(GS))的概念。 GS的质量不佳(例如,由于分割者之间和评估者内部的差异)可能会导致偏差估计错误,从而对验证产生不利影响。在此,我们提出了一种新颖的框架,用于在没有GS的情况下对多种测量方法进行基准测试。该框架包括(i)一个误差模型,说明通过这些方法提取的测量值之间相关的随机误差;(ii)基于误差模型参数的联合后验概率的新目标;(iii)马尔可夫链蒙特卡洛对后验进行采样。后验分析不仅可以估计误差模型参数(系统误差和随机误差),从而对方法进行基准测试,还可以估计QIB的未知真实值。通过应用于临床脑MRI数据集的四种自动分割方法对多发性硬化症总病变负荷测量所提出的框架进行验证,结果表明误差模型和真实值估计与基于已知GS的相应最小二乘估计非常吻合。

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