首页> 外文会议>Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009 >Phylogenetic Analysis of Four Vibrio Strains of Pathogenic Bacteria Based on Hemolysin Genes and 16S rRNA Genes
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Phylogenetic Analysis of Four Vibrio Strains of Pathogenic Bacteria Based on Hemolysin Genes and 16S rRNA Genes

机译:基于溶血素基因和16S rRNA基因的四种病原菌弧菌菌株的系统发育分析

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In order to understand the phylogenetic relationships among vibrio species more rationally , the hemolysin gene partial sequences of 4 vibrio species (vibrio alginolyticus, vibrio harveyi, vibrio parahaemolyticus, vibrio minius) were amplifyed and sequenced. We constructed two separate phylogenetic trees by using 16S rRNA and partial hemolysin gene sequences, respectively.The average similarities of hemolysin gene of vibrio species was 37.2%. Meanwhile, the average similarity of 16S rRNA gene of vibrio species was 91.4%. The variabilities of hemolysin gene in vibrio is greater than that of 16S rRNA gene. By comparing the phylogenetic trees, the topology of hemolysin gene tree is almost consistent with that of 16S rRNA gene tree. Consequently, the hemolysin gene possesses the superiority in phylogenetic taxonomy of the genus vibrio. Taxonomic classification of vibrios with hemolysin gene instead of 16S rRNA gene was proved a better approach.
机译:为了更合理地了解弧菌>之间的亲缘关系,我们对4种弧菌( vibrio alginolyticus, 弧菌 harveyi, 弧菌 parahaemolyticus, 弧菌 minius )进行扩增和测序。我们分别使用16S rRNA和部分溶血素基因序列构建了两个独立的系统发育树。弧菌属溶血素基因的平均相似度为37.2%。同时,弧菌16S rRNA基因的平均相似度为91.4%。弧菌中溶血素基因的变异性大于16S rRNA基因。通过比较系统进化树,溶血素基因树的拓扑结构与16S rRNA基因树的拓扑结构几乎一致。因此,溶血素基因在弧菌属的系统发育分类学中具有优势。用溶血素基因代替16S rRNA基因对弧菌进行分类的方法被证明是一种更好的方法。

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