首页> 外文会议>2011 international conference on bioinformatics and biomedical technology >Genetic Diversity within and among Populations of Acarus siro L. Revealed by Inter Simple Sequence Repeats (ISSR)
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Genetic Diversity within and among Populations of Acarus siro L. Revealed by Inter Simple Sequence Repeats (ISSR)

机译:通过简单的序列间重复(ISSR)揭示了A螨的种群内部和种群之间的遗传多样性

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Acarus siro L., a common acaroid mite in China, is one of the main pest mites damaging the stored products, economic crops and edible fungi. The mite is widely studied due to its economic importance. In this paper, the genetic structure and genetic diversity of A. siro in four geographic populations were studied by using ISSR marker. 18 primers were selected for their ability to produce clear and reproducible patterns of polymorphic bands. Those primers were then used for analysing genetic diversity within and among populations of A. siro collected in Nanchang city, Jiujiang city in Jiangxi province and Hefei city, Caohu city in Anhui province (NC, JJ, HF, CH). A total of 136 DNA bands were yielded, 107 of which were polymorphic and PPB was 78.68%. The levels of genetic diversity of four population could be ordered in abundance as JJ> NO HF> CH and the JJ population was the highest level. The value of Gst was 0.6283, indicating high level of genetic differentiation among populations. Nei's genetic diversity analysis showed that the level of gene flow (Nm=0.3717) was lower than that among populations (Nm=0.29). Dendrogram constructed using the UPMGA method and Nei's unbias genetic distance showed the same location could be clustered together to form a specific clade. Geographic difference caused great differentiation. Moreover, there was no significant correlation between the genetic distance and geographic distance, indicating that geographic isolation was not the main factors inducing genetic difference.
机译:中国常见的粉状螨(Acarus siro L.)是破坏储存产品,经济作物和食用真菌的主要害虫之一。由于其经济重要性,对螨进行了广泛的研究。本文利用ISSR标记研究了4个地理种群中A. siro的遗传结构和遗传多样性。选择了18种引物,以产生清晰,可重复的多态性谱带。然后将这些引物用于分析在江西省九江市南昌市和安徽曹湖市合肥市(NC,JJ,HF,CH)采集的西伯利亚A种群内部和种群之间的遗传多样性。共产生136条DNA条带,其中107条是多态性的,PPB为78.68%。由于JJ> NO HF> CH,四个种群的遗传多样性水平可以有序地排列,而JJ种群的水平最高。 Gst的值为0.6283,表明人群之间的遗传分化水平很高。 Nei的遗传多样性分析表明,基因流动水平(Nm = 0.3717)低于人群之间的水平(Nm = 0.29)。使用UPMGA方法构建的树状图和Nei的无偏遗传距离表明,可以将同一位置聚集在一起以形成特定的进化枝。地理差异引起了巨大的差异化。而且,遗传距离与地理距离之间没有显着的相关性,表明地理隔离不是引起遗传差异的主要因素。

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