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Accelerating Reaction Rates of Biomolecules by Using Shear Stress in Artificial Capillary Systems

机译:用人工毛细管系统中使用剪切应力加速生物分子的反应速率

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摘要

Biomimetics is a design principle within chemistry, biology, and engineering, but chemistry biomimetic approaches have been generally limited to emulating nature's chemical toolkit while emulation of nature's physical toolkit has remained largely unexplored. To begin to explore this, we designed biophysically mimetic microfluidic reactors with characteristic length scales and shear stresses observed within capillaries. We modeled the effect of shear with molecular dynamics studies and showed that this induces specific normally buried residues to become solvent accessible. We then showed using kinetics experiments that rates of reaction of these specific residues in fact increase in a shear-dependent fashion. We applied our results in the creation of a new microfluidic approach for the multidimensional study of cysteine biomarkers. Finally, we used our approach to establish dissociation of the therapeutic antibody trastuzumab in a reducing environment. Our results have implications for the efficacy of existing therapeutic antibodies in blood plasma as well as suggesting in general that biophysically mimetic chemistry is exploited in biology and should be explored as a research area.
机译:生物体是化学,生物学和工程中的设计原则,但化学仿生方法通常限于模仿大自然的化学工具包,而自然的物理工具包的仿真仍然很大程度上是未开发的。要开始探索这一点,我们设计了具有特征长度尺度和毛细管内观察到的剪切应力的生物物理学模拟的微流体反应器。我们建模了剪切与分子动力学研究的影响,并表明这诱导特定的通常埋地残留物变成溶剂。然后,我们使用动力学实验显示,这些特定残留物的反应率实际上增加了剪切依赖性的方式。我们将我们的成绩应用于创建一种新的微流体方法,用于半胱氨酸生物标志物的多维研究。最后,我们利用我们的方法在还原环境中建立治疗性抗体曲妥珠单抗的解离。我们的结果对血浆中存在治疗性抗体的疗效有影响,并建议在生物学中利用生物物理学模仿化学,并应探索作为研究区域。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2021年第40期|16401-16410|共10页
  • 作者单位

    Tuuli A. Hakala - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Emma V. Yates - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Pavan K. Challa - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Zenon Toprakcioglu - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Karthik Nadendla - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Dijana Matak-Vinkovic - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Christopher M. Dobson - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom;

    Rodrigo Martinez - Departamento de Quimica Universidad de La Rioja 26006 Logrono Spain;

    Francisco Corzana - Departamento de Quimica Centro de Investigacion en Sintesis Quimica Universidad de La Rioja 26006 Logrono Spain;

    Tuomas P. J. Knowles - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom Cavendish Laboratory University of Cambridge CB3 0HE Cambridge United Kingdom;

    Goncalo J. L. Bernardes - Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW United Kingdom Instituto de Medicina Molecular Joao Lobo Antunes Faculdade de Medicina de Universidad de Lisboa 1649-028 Lisboa Portugal;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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  • 正文语种 eng
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