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首页> 外文期刊>Journal of the American Chemical Society >Vibrational Coupling, Isotopic Editing, and β-Sheet Structure in a Membrane-Bound Polypeptide
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Vibrational Coupling, Isotopic Editing, and β-Sheet Structure in a Membrane-Bound Polypeptide

机译:膜结合多肽中的振动耦合,同位素编辑和β-Sheet结构

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摘要

The N-acetylated hexapeptide WLLLLL (AcWL5) partitions into lipid membranes and is believed to assemble into an antiparallel β-sheet. As a test of this structural assignment, the peptide bonds of residues 2-6 were labeled with ~(13)C and allowed to adsorb onto a supported lipid membrane. Peptides bound to the membrane were examined for evidence of coupling between the labeled vibrational modes in adjacent -strands with internal reflection infrared spectroscopy. Experimental results indicate that the amide I absorption band in D_2O (i.e., amide I') attributable to ~(13)C is selectively enhanced when the label is at any one of several positions along the peptide backbone. Simulations employing an excitonic model with through-bond and through-space interactions were performed on AcWL5 models in parallel and antiparallel β-sheet configurations. The simulations yield spectra in good agreement with the experimental results, accounting for the enhancement of both ~(13)C band intensities and band frequencies. They also yield insight into the physical origin and structure selectivity of the distinctive amide I' band shapes that arise in isotopically edited spectra. It is concluded that the β-sheet formed by membrane-bound AcWL5 is indeed antiparallel, and the enhancement of ~(13)C bands in the infrared spectra of these peptides is caused by both interstrand and intrastrand coupling to ~(12)C modes.
机译:N-乙酰化的六肽WLLLLL(AcWL5)划分为脂质膜,据信可以组装成反平行的β-折叠。作为对该结构分配的测试,残基2-6的肽键用〜(13)C标记,并使其吸附在负载的脂质膜上。用内反射红外光谱法检查结合到膜上的肽,以寻找相邻链中标记的振动模式之间耦合的证据。实验结果表明,当标记位于沿肽主链的几个位置中的任何一个位置时,归因于〜(13)C的D_2O中的酰胺I吸收带(即酰胺I')被选择性增强。在具有平行和反平行β-sheet结构的AcWL5模型上进行了采用具有键合和空间相互作用的激子模型的模拟。模拟产生的光谱与实验结果非常吻合,说明了〜(13)C波段强度和波段频率均得到增强。他们还提供了对同位素编辑光谱中出现的独特酰胺I'带形状的物理起源和结构选择性的了解。结论是膜结合的AcWL5形成的β-折叠确实是反平行的,并且这些肽的红外光谱中〜(13)C谱带的增强是由链间和链内耦合到〜(12)C模式引起的。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2004年第18期|p. 5843-5850|共8页
  • 作者单位

    Departments of Pharmacology, Biochemistry and Biophysics, and Medicine, the Johnson Foundation for Molecular Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104;

    Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;

    Department of Biochemistry, Tulane University, New Orleans, Louisiana 70112;

    Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;

    Departments of Pharmacology, Biochemistry and Biophysics, and Medicine, the Johnson Foundation for Molecular Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 化学;
  • 关键词

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