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Structural Insights into the Ferroxidase Site of Ferritins from Higher Eukaryotes

机译:高等真核生物对铁蛋白铁氧化酶位点的结构观察

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摘要

The first step of iron biomineralization mediated by ferritin is the oxidation at the ferroxidase active site of two ferrous ions to a diferric oxo/hydroxo species. Metal-loaded ferritin crystals obtained by soaking crystals of frog ferritin in FeSO_4 and CuSO_4 solutions followed by flash freezing provided X-ray crystal structures of the tripositive iron and bipositive copper adducts at 2.7 and 2.8 A resolution, respectively. At variance with the already available structures, the crystal form used in this study contains 24 independent subunits in the asymmetric unit permitting comparison between them. For the first time, the diferric species at the ferroxidase site is identified in ferritins from higher eukaryotes. Anomalous difference Fourier maps for crystals (iron crystal l) obtained after long soaking times in FeSO_4 solution invariantly showed diferric species with a Fe-Fe average distance of 3.1 ± 0.1 A, strongly indicative of the presence of a μ-oxo/hydroxo bridge between the irons; protein ligands for each iron ion (Fe1 and Fe2) were also unequivocally identified and found to be the same in all subunits. For copper bound ferritin, dicopper(Ⅱ) centers are also observed. While copper at site 1 is essentially in the same position and has the same coordination environment as Fel, copper at site 2 is displaced toward His54, now acting as a ligand; this results in an increased intermetal distance (4.3 ± 0.4 A). His54 coordination and longer metal-metal distances might represent peculiar features of divalent cations at the ferroxidase site. This oxidation-dependent structural information may provide key features for the mechanistic pathway in ferritins from higher eukaryotes that drive uptake of bivalent cation and release of ferric products at the catalytic site. This mechanism is supported by the X-ray picture obtained after only 1 min of soaking in FeSO_4 solutions (iron crystal 2) which reasonably contain the metal at different oxidation states. Here two different di-iron species are trapped in the active site, with intermetal distances corresponding to those of the ferric dimer in crystal 1 and of the dicopper centers and corresponding rearrangement of the His54 side chain.
机译:铁蛋白介导的铁生物矿化的第一步是在两个亚铁离子的铁氧化酶活性位点上氧化成二铁氧代/羟基铁。通过将青蛙铁蛋白的晶体浸泡在FeSO_4和CuSO_4溶液中,然后进行快速冷冻而获得的负载金属的铁蛋白晶体,分别提供了2.7和2.8 A分辨率的三正铁和双正铜加合物的X射线晶体结构。与已经存在的结构不同,本研究中使用的晶体形式在不对称单元中包含24个独立的亚基,允许它们之间进行比较。第一次在高铁真核生物的铁蛋白中鉴定出了铁氧化酶位点的二铁物种。在FeSO_4溶液中长时间浸泡后获得的晶体(铁晶体l)的异常差傅里叶图始终显示出二价铁物种,Fe-Fe平均距离为3.1±0.1 A,强烈表明之间存在μ-氧代/羟基桥铁杆每个铁离子(Fe1和Fe2)的蛋白质配体也得到明确鉴定,并且在所有亚基中都相同。对于铜结合的铁蛋白,还观察到双铜(Ⅱ)中心。虽然位点1处的铜与Fel基本处于相同位置并具有相同的配位环境,但位点2处的铜向着His54迁移,现在成为配体。这导致金属间距离增加(4.3±0.4 A)。 His54的配位作用和更长的金属-金属距离可能代表了二价阳离子在铁氧化酶位点的特殊特征。这种依赖于氧化的结构信息可以为来自高等真核生物的铁蛋白中的机械途径提供关键特征,这些机制驱动二价阳离子的吸收并在催化部位释放铁产物。在FeSO_4溶液(铁晶体2)中浸泡1分钟后获得的X射线照片支持了这种机理,FeSO_4溶液合理地包含处于不同氧化态的金属。在这里,两种不同的二铁物种被捕获在活性位点,金属间距离对应于晶体1中铁二聚体和双铜中心的金属间距离以及His54侧链的相应重排。

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  • 来源
    《Journal of the American Chemical Society》 |2012年第14期|p.6169-6176|共8页
  • 作者单位

    Magnetic Resonance Center (CERM) University of Florence, 50019 Sesto Fiorentino, Florence,Italy,Department of Chemistry, University of Florence, 50019 Sesto Fiorentino, Florence,Italy;

    Magnetic Resonance Center (CERM) University of Florence, 50019 Sesto Fiorentino, Florence,Italy;

    Magnetic Resonance Center (CERM) University of Florence, 50019 Sesto Fiorentino, Florence,Italy,Department of Chemistry, University of Siena, 53100 Siena, Italy;

    Department of Chemistry, University of Siena, 53100 Siena, Italy;

    Magnetic Resonance Center (CERM) University of Florence, 50019 Sesto Fiorentino, Florence,Italy;

    Council on Biolron at Children's Hospital Oakland Research Institute, Oakland, California 94609, United States,Department of Nutritional Sciences and Toxicology, University of California, Berkeley, California 94720, United States;

    Magnetic Resonance Center (CERM) University of Florence, 50019 Sesto Fiorentino, Florence,Italy,Department of Chemistry, University of Florence, 50019 Sesto Fiorentino, Florence,Italy;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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